Nematolebias whitei (Rio pearlfish): 119408542
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Entry
119408542 CDS
T08042
Symbol
rnf44
Name
(RefSeq) RING finger protein 44 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119408542 (rnf44)
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119408542 (rnf44)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119408542 (rnf44)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
VPS18_RING_C
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
119408542
NCBI-ProteinID:
XP_037531308
LinkDB
All DBs
Position
4:29234400..29248806
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AA seq
439 aa
AA seq
DB search
MRPWEIAVNRLPPTAPLNLRRFLGEPCNAPVHLRRSPPVRRQWGGRDRPVLHSSPVQDEN
FHQLLFSQHPQQIPLDESRQYSHTSTAPRMLHPAAHLPQQSPIMVDLHDQMHQGSVPISY
TVTTVTTHGFPIHTGQPLPGCSAQQLPACSVMFSGQLSLLCCLPPPLIQACTMQHIPVSY
QAFPPLISSEHFVLHPTPSVPPHQPPHLAPLSQFVPLQPQHPRMPLQRVENDVDLRGDQH
PLGTFTYPPSHHPPALPPSLPLQYLPQEPLHQELPFGVPYPHMLPRRMNGQRFRLQQPLP
PPPPPSYYPGFLPYFLSMLPVPPTAVGPAISLDLDVDDVEMENYEALLNLAERLGEAKPR
GLTKADIELLPSYRFNSKNHLSEQTLCVVCFSDFECRQLLRVLPCNHEFHAKCVDKWLKT
NRTCPICRADASDVHREVE
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccatgggaaatagcagtaaataggctgccaccaacagcccccttaaacctgagg
aggttccttggagagccctgcaacgctccagtgcatctcaggagaagtccaccagtgaga
cgccagtgggggggacgagacagacctgtactgcacagttcccctgtccaggatgagaac
ttccatcagctgcttttctcccaacacccccaacagattcctttagatgagtcgagacag
tacagccacaccagcacagcaccacgcatgctccaccctgctgcccacctgccccagcag
agccccatcatggtggatctacatgatcagatgcaccagggatcggttccgatctcgtac
actgttacaactgtgacgacccacggatttcccattcacaccgggcagccccttccaggg
tgcagcgctcagcagctcccagcatgctcggtaatgttcagcggacagctctctctgctc
tgctgccttcctcctcctctcatacaggcatgtaccatgcagcatattcctgtgtcttat
caagccttcccaccgctgatctccagcgagcattttgtattgcacccgaccccatctgtc
cccccccaccagccgccgcaccttgctcctttgagccagtttgtccctttacagcctcag
cacccacgcatgcctctacagagggtagagaatgatgttgacctaagaggagaccagcac
ccattaggcactttcacctaccctccttcacatcacccaccagcgctgcctccttcactg
cccctacagtatcttcctcaagagcctctgcatcaggagcttcctttcggagtgccatat
ccacacatgctgccgcggcgaatgaatggacagaggtttcggctgcagcagcctctcccc
cctcctcctcctccatcttactacccaggcttcctcccttatttcttgtcaatgcttcct
gtgcctccaacagctgtgggtccagccatcagcttagacctggatgtggatgatgtggag
atggagaactatgaagcattactgaacttggcagagaggttgggtgaagcaaaaccacgc
ggactcacaaaagcagatatagagttacttccgtcctatagattcaactcaaaaaatcac
ctgtctgaacaaacgctgtgtgtcgtgtgctttagtgactttgagtgtaggcagctactt
cgagtattaccttgtaaccacgaattccacgccaaatgtgtggataaatggttaaagacc
aatcgcacttgtccgatctgccgagccgacgcctcggatgttcaccgggaggtggagtga
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