Nematolebias whitei (Rio pearlfish): 119408553
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Entry
119408553 CDS
T08042
Name
(RefSeq) cohesin subunit SA-2
KO
K06671
cohesin complex subunit SA-1/2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119408553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119408553
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
119408553
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SSDB
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Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
AdoHcyase_NAD
Motif
Other DBs
NCBI-GeneID:
119408553
NCBI-ProteinID:
XP_037531324
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Position
4:32264980..32296987
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AA seq
1271 aa
AA seq
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MIAAPEIHSEFAYTQDTDTRFSSDTDFSEDLDGRTANKGKGGKKGKKGAGEKGKGGKGAG
RINGHHQENGMENVMLFEVVKLGRSAMQSVVDEWIESYKHDRDVALLDLINFFIQCSGCK
GVVTGEMFRNMQNSEIIRRMTEEFDEDSGDYPLTIAGPQWKKFKTSFCEFISVLVRQCQY
SIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQY
EAERNKIVAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDSIAEIRAIC
IEEIGVWMKLYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNRELNARLELFT
SRFKDRIVSMTLDKEYDVAVQAIKLLTLVLNSTDEVLTPEDCESVYHLVYSAHRPVAVAA
GEFLYKKLFSQREPEEEGAPKRRGRQSLNANLIKTTVFFFLESELHEHAAYLVDSLWECG
AELLKDWECMISLLIDDPLPGEEALTDRQETALIEIMLCTVRQAAECHPPVGRGTGKRVM
TAKEKKTQLDDRTRLTELFAVALPPLLAKYAVDAEKVTNLLQLPQYFDLEIYTTGRLEKH
LDALLRQIKEIVEKHTDTEVLESCSKTYHALCNEEFTIFNRVDISRSQLLDELVDKFTRL
LEDFLQEGEDADEDDVYQVLSTLKRITAFHNAHDLSGWDLFTSNFKLLNTGIENGDMPEQ
IVIHSLQCTHYVILWQLAKLSEGSSRKDDMVTLRKQMRAFCLMCQRYLTNVNTAVKEQAF
TILCDLLLIFSHQMVSGGREHLEPLVYSPEDSLQSELLSFVLNHVFIDQDDDTNSTDGQQ
DDEAVKIEALHKRRNLLAAYCKLIIYCVVEMKTGADIFKQYMRYYNDYGDIIKETMSKTR
QIDKIQCAKTLILSLQQLFNEMLSELGHGFDRSSSAFCGIKELARRFSLTFGLDQVKTRD
AIAMLHKDGIEFAFKEPSPQGEGGPPLNLAFLDILSEFSSKLMRQDKRTVHMYLERFMTF
QMALQREDCWLPLISYRNSLQAGGDDDTMSVMSGYSSRGSSVRSKKAKPPVATAGTSAAK
RKLPEEESSSAVEAWQQSIQTPVMLPSPHLTSTAMRDPKRGRDDSYMGVYALPHEQPQPH
QHPQHHQQTPQHHQTPMDYNSQVTWMLAQRQQEEARQHQERAMNYAKLRSNLQHAIRRGT
GLMEEDEEPIVEDVMMSSEGRMDDLNEGMDFDTMDIDLPPSKNRRERSELKPDYFDPASI
MDESVLGVSMF
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcaccagaaatacactcagagtttgcctacactcaggatacagatactaga
ttttcctcagacacagacttctctgaggatctagatggaaggactgcaaataaaggaaag
ggtgggaagaaggggaagaaaggtgcaggggagaaaggcaaaggaggaaagggtgcaggc
cggataaatggccaccaccaggaaaatggcatggaaaacgtgatgctgtttgaggtggta
aaactgggcagaagtgcaatgcagtctgttgttgatgagtggattgaatcttacaaacat
gacagggatgttgcactgctagatctcatcaacttctttattcagtgctcaggatgtaaa
ggtgtggtcaccggagaaatgtttcgaaacatgcagaactctgagatcattcgacgaatg
acagaggaatttgatgaggacagcggcgattatcctctaaccatagccgggccacagtgg
aagaagttcaaaacaagcttttgtgaattcatttcagtgctcgttcgccagtgtcaatac
agtatcatttatgatgagtacatgatggacactgtcatctctcttcttactggactatca
gactcccaagttcgagctttcagacacacctcaacactggcagccatgaagctgatgaca
gccctggtgaatgtagctctaaacctgagcattaacatggataacacccagcgccagtat
gaggcagagaggaataagattgttgctaaaagggcaaatgacaggctggagctgctcctg
caaaaacgcaaagagcttcaagaaaatcaggatgaaattgaaaacatgatgaatgcaatt
ttcaaaggagtgttcgtccatcgatatcgggattcaatagcagaaatcagggcaatctgt
atagaggagattggagtatggatgaaactctacagtgatgccttcctcaacgacagttat
ttgaagtatgtgggatggacaatgcatgataagcaaggagaggtacgtctgaagtgtctg
acggctctgcagggcctttactacaacagagagctcaatgcaagactggagctcttcacc
agtcgctttaaggaccgtattgtctctatgactcttgataaggagtatgatgttgcagta
caagctattaaacttctcactctagtcttaaatagtacagatgaggtgttgacccctgag
gactgtgagagcgtctaccacttggtctactctgcacacaggccggtcgctgttgcagct
ggagagttcttatataagaaattgttcagccagcgagaaccagaggaggaaggagcccct
aaaagaagaggaagacaaagtctgaacgccaacctcattaagaccaccgtctttttcttc
cttgagagcgagctccatgaacatgcagcatacttggtggattccctctgggaatgtggt
gcagagctactgaaagactgggagtgtatgatcagcttattgatagatgacccattacca
ggagaggaagctcttactgacagacaagaaacagctttgattgaaatcatgctgtgcact
gtacgtcaggctgctgaatgccacccacctgttggaagaggaacaggcaagagggtaatg
acagctaaagagaagaagactcagctggatgatcgaacaagattaacggagctgtttgct
gtggctttgccgcctctactggccaagtatgctgttgatgcagagaaggtgacgaacttg
ttacagttgcctcagtactttgatctggaaatttacaccactggacgtctagagaagcat
ctggacgccctgctgcgtcagattaaagaaattgtggagaaacacacggacacagaagtt
ctggagtcctgctcaaagacctaccatgctctctgcaacgaggagttcacaatctttaac
agggtagatatatcccgctcccagctcctggatgagctggtggacaagttcacaaggctg
ctggaggatttcctacaagagggtgaagatgctgatgaagatgatgtttatcaggttttg
tcgactttgaagaggatcacagcatttcataatgcacatgacctgtcggggtgggacctc
tttaccagcaacttcaaacttctcaacacgggtatagaaaatggagatatgcctgaacag
atagtcattcattcactgcagtgcacccactatgttattctgtggcagctggccaaactg
tctgagggcagctccagaaaggatgacatggtgaccctgaggaaacagatgagggcgttc
tgtttgatgtgtcagcgctacctcacaaacgttaacacggccgtcaaagagcaggctttc
accatcctgtgtgatctcctgctcatctttagccaccagatggtgtctgggggcagggaa
cacttggagcccttggtctattccccagaggactctttacagtctgaactgctctccttc
gtcctcaaccacgtcttcatagaccaggacgatgacacaaatagcacagatgggcagcaa
gacgacgaggcagtaaaaattgaagctttgcacaagaggagaaacctcctggctgcctac
tgtaagctcatcatctactgtgttgtagaaatgaaaactggggccgacatcttcaaacag
tacatgaggtattataatgattatggtgacatcatcaaggaaactatgagtaaaactcgg
caaattgacaagattcaatgtgcgaagacgctcattcttagtctgcagcagctgtttaat
gaaatgctgtcggaactgggtcatggatttgatcgatcctcctctgcgttctgtggaatc
aaagagttggcccgtcggttttctctaacctttgggctcgaccaagtcaaaaccagagat
gccattgctatgttgcacaaggatggtattgagtttgcatttaaggagcccagtcctcaa
ggagagggaggtcctcctctcaacttggcgttcttagacatcctgagcgagttctcctcc
aaactcatgagacaagataagaggactgtccacatgtacctggagcgcttcatgacgttc
cagatggcgctgcaacgagaggactgctggcttccactgatctcctacagaaactcgctg
caggctgggggtgatgacgacaccatgtctgtcatgagcggctactccagccgaggctcc
tccgttcgctccaagaaggccaaaccacctgtggctacagccggaacgtcggcagcaaag
aggaaactgccagaggaggagagcagcagtgccgtcgaggcttggcagcaaagcatccag
acccctgtcatgttgccctccccccatctcacctctacagccatgcgagaccccaaaaga
ggtcgtgatgacagctacatgggggtctacgctcttcctcacgagcagcctcagccccac
caacacccgcagcaccatcaacagacgccacagcaccaccagacacccatggattacaat
tcccaggtgacgtggatgctggcgcagagacagcaagaggaggcgcgccagcaccaagaa
agagccatgaactacgccaagctcaggtccaatctgcagcatgccattcgtcgcggcacc
gggctgatggaggaagacgaagagcctattgtagaggatgttatgatgtcatccgagggt
cgcatggatgacctcaatgaaggcatggactttgacaccatggacattgatctgccacca
tctaaaaaccgccgtgagagatctgagctcaagcccgactacttcgatcctgcttcaatc
atggatgaatcggtccttggggtgtccatgttttaa
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