Nematolebias whitei (Rio pearlfish): 119408575
Help
Entry
119408575 CDS
T08042
Name
(RefSeq) protocadherin-10
KO
K16499
protocadherin delta 2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119408575
Cell adhesion molecules [BR:
nwh04515
]
Cadherins
Protocadherins
119408575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Bact_surface_Ig-like
Motif
Other DBs
NCBI-GeneID:
119408575
NCBI-ProteinID:
XP_037531344
LinkDB
All DBs
Position
4:42289133..42334585
Genome browser
AA seq
1043 aa
AA seq
DB search
MRTCMTPLLLFVVVVYQSALVVPDMLALLLLVWLTAGVRAQIRYSVPEEADRGTLVGNIA
EDLGLDLTKLASRHFQVVPSSRSPYLEVDLENGVLMVKERVDREQICRQSARCQLNMEVF
LENPLELFRVEIEVVDINDNPPSFPEPDLTVEISESATPGTRFPLESAFDPDVGSNALRT
YDLTTNNFFYLDVQTQTDGNKFAELVLEKPLDREQQAAHRYVLTAVDGGQPPRTGTALLV
VKVLDSNDNVPVFEQPVYTVSLSENIPVGSPVIQLNATDLDEGLNGEVVYSFSNHISSRV
KDLFSIDPRTGRVEVRGEVDFEETGLYQIFVQAKDLGPNAVPAHCKVLVKVVDVNDNAPE
ITFSTVTESVRESATSGTVIALLSVTDRDSEENGQIHVEILGEVPFKLKSSFRNYFTIVT
DGQLDREHTDSYSVTVVARDKGTPSLASSKSIRVQVSDENDNAPTFTQSVYDVYVTENNV
PGAYIHAVTALDPDVGQNALITYSISERDIQGMSVKTYVSINEDTGYLYALRSFDYEQLK
DFSFVVRAQDSGTPQLSSNATVKVIIVDQNDNAPSVLAPLGKNGSAKEPLPRSAEPGYLV
TRVVAMDTDDGENARLSYSIQRGNENGMFRMDWRTGELRTARRISPKRDPHQMYDLLIEV
RDHGQPPLSSSASLLVVLVDSVAAGRGLGDKVGTNKSKDSSLDLTLILIIALGSVSFVFL
LVMIVLAVRCQKDKKLTLSPCMGCSSCCSRQVRSRKKKLSKSDIMLVQSTVNVSGTGTSQ
VPVEESGSFGSLHQNQNYCYQVCLTPESAKTDLMFLKPCSPSRSSDADHNPCGAIGSGFS
DPQPDIISNGSILSNETKHHQRSELSYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGD
SDHDATNRGHSAGADLFSNCTEECKALGHSDRCWMPSFVASDGRQGLDYRSNLHVPGMDS
VPDTEVFESPEQTADNSFSTFGKETPLIHHPLHHPKNHHCHLQTPPVSQHLVSERKVLDS
FLPHSSSATNTSYLSEYSVLPPS
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgcggacctgcatgacaccattgctgctgtttgttgttgttgtttaccaaagtgcgctt
gttgttccggacatgctcgcgctcctgctgctcgtatggctcactgccggagtgcgcgcc
cagatccggtactcggtcccggaggaggcggaccgcggcacgcttgtgggcaacatcgcg
gaggacctgggtctggacttgaccaagctggcctcgcgccacttccaggtggtacccagc
tccaggagcccgtacctggaggtggacctggagaacggggtcctgatggtgaaggagcgc
gtggaccgggagcagatctgcaggcagagcgcgcgctgccagctcaacatggaggtgttc
ctggaaaacccgctggagctgttccgggtggagatcgaggtagtggacatcaacgacaac
ccgcccagcttccccgaaccggacctgacggtggagatctctgagagcgccactcccggg
acccggttccccctggagagcgccttcgacccggacgtgggctcgaacgcgctgcggacc
tacgacctgaccaccaacaacttcttctacctggacgtccagacccagacggacggaaac
aagttcgcagagctggtcctggagaagccgctggaccgggagcagcaggcggcgcaccgg
tacgtcttgactgcggtggacgggggccagcccccccgcaccgggaccgcgctgctggtg
gtcaaagttctggactcaaacgacaacgtgccggtgtttgagcagccggtctacacggtg
agtctgtccgagaacatcccggtggggtccccggtgatccagctcaacgccacggacctg
gacgagggtctgaacggggaggtggtctactccttcagcaaccacatctccagccgggtc
aaggacctgttcagcatagacccgcggaccggccgcgtggaggtgcgcggggaggtggac
ttcgaggagaccggcctctatcagatcttcgtccaggccaaggacctgggtccgaacgcc
gtgcccgcgcactgcaaggttctggtcaaagtcgtggacgtgaacgacaacgcgccggag
atcaccttcagcaccgtgaccgagtccgtgcgtgagagcgcgacctccgggaccgtgatc
gccttactgagcgtcacggaccgggactcggaggaaaacgggcagatccacgtggagatc
ctgggagaggttccattcaagctcaagtcctcattcaggaactacttcaccatcgtgaca
gacggacagctggaccgggagcacacggactcctactccgtcaccgtggtggcccgggac
aaagggaccccgtccctggcctccagtaagtccatcagggtccaggtgtcagatgagaac
gacaacgcccccaccttcacgcagtccgtgtacgatgtgtacgtgacagagaacaacgtg
ccgggggcctacatccacgcagtgacggctctggacccggatgtgggtcagaacgccctc
atcacctactccatctcagagcgggacatccagggcatgtcggtgaagacctacgtgtcc
atcaacgaagacaccgggtacctgtacgccctgaggtcctttgactacgagcaactgaag
gacttcagcttcgtggttcgggcccaggactcagggaccccccagctgtcctccaacgcc
acggtcaaagttatcatcgtggaccagaacgacaatgccccgtcggttctggccccgctg
gggaagaatgggtccgctaaggagcccctccctcgctcagcagagccgggctacctggtg
acccgggtggttgccatggatacggatgatggggagaatgcccgtttgtcctacagcatc
cagaggggcaacgagaacggcatgttcagaatggactggaggaccggggagctgaggacc
gccaggagaatctcgcctaagagagacccccaccaaatgtacgacctgctgatcgaggtc
cgggaccatggccagccccccctgtcctccagcgccagcctgctggtggttctggtggac
agtgtggctgctggccggggccttggggacaaagtgggcaccaacaagtccaaggacagc
tccctggacctgaccctgatcctcatcatcgccctgggctccgtctccttcgtcttcctc
ctggtcatgatagttctggcggtccggtgccagaaggacaagaagctgaccctgtccccc
tgcatgggctgcagctcctgctgctcccggcaggtccgctcccgcaagaaaaaactcagc
aagtccgacattatgctggtccagagtacggtcaacgtcagcgggaccgggacctcccag
gtccccgttgaggagtctgggagcttcggctccctccaccaaaaccagaactattgctac
caggtctgcctgactccagagtccgctaaaacggacctcatgttcctgaaaccgtgcagt
ccgtccaggagctcggatgccgatcacaacccttgcggggccatcgggtccgggttctcc
gacccgcagccggacatcatctccaacggcagcatcttgtccaacgagaccaaacatcac
cagcgaagtgaactcagctacctggtggaccggccgagacgggtcaacagctctgcattt
caggaggctgatctggtgagctctaaagacagcggccatggagacagtgagcagggggac
agtgaccatgacgccaccaatcgaggacattccgctggtgcagatctgttctccaactgc
acagaggagtgcaaggccctgggtcactctgaccgctgctggatgccgagctttgtggcc
tccgatgggcgccagggtctggactaccgtagcaacctccatgtgcctggcatggactca
gtcccagacacagaggtatttgaaagcccagagcaaacagctgacaattcattctccaca
tttggtaaagagacgcctctcattcaccaccccctccaccatcccaaaaaccaccactgt
catcttcagacccccccagtcagccagcacctcgtctcagagaggaaagtgctggactct
tttctgcctcactccagttcagctactaacacttcttatttaagtgagtattctgtgctg
cctccatcttag
DBGET
integrated database retrieval system