Nematolebias whitei (Rio pearlfish): 119408609
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Entry
119408609 CDS
T08042
Symbol
gabra6a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6a
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04080
Neuroactive ligand-receptor interaction
nwh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119408609 (gabra6a)
04082 Neuroactive ligand signaling
119408609 (gabra6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119408609 (gabra6a)
Ion channels [BR:
nwh04040
]
Ligand-gated channels
GABA-A
119408609 (gabra6a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
119408609
NCBI-ProteinID:
XP_037531383
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All DBs
Position
4:complement(24176103..24194958)
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AA seq
497 aa
AA seq
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MAATSLSLIALICWISVGNVQGSVKIDSDNITRILDRLLDEYDNRLRPGSGGGITEVKTD
IFVTSFGPVSDVEMEYTMDMFFRQMWVDERLKFDGPTEILRLNNKMVEKIWTPDTFFRNS
KKSISHNMTTPNKLFRIMQNGTVLYTMRLTINAECPMNLMDFPMDGHSCPLRFGSYGFTS
SEIRFTWRKGLKSSVECPKESMSLLQYDLVGQTLSSETLKSSTGHYSVQVVHFHLQRKLG
YYLIQTYIPLIMVVVLSQVSFWINKESVPARTVAGITTVLTMTTLSISARQSLPKVAYAT
AMDWFIAVCFAFVAFALVEFAAVNYFATLQANRLKKEKARQDRLEVLAAGSEDDDTISMD
SSLQEGLKKRNHSMSNNVPHLLIFLQQGSAVPQFPQLAGTSRIDVYARVLFPLTFALFNL
VYWYIYLTKDTTPGVDETSDLHRDPSVTLNPNRCTATSQVETVAATQAKDAQRHAQRPRT
ASEKDGDDIICDGCNWW
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggctgctacttctttaagtttgattgctttaatctgctggattagtgtaggtaatgta
caaggaagtgtaaagatagactcagacaatatcactcgcattttggatagacttttggat
gaatatgacaatagattacgacctggttctggaggtggaattacagaagtgaaaacagac
atctttgtcaccagctttggaccagtttcagatgttgagatggaatacaccatggacatg
ttcttccgtcagatgtgggttgacgagaggctcaaatttgatggtcccactgaaatttta
cgcctgaacaacaaaatggtggagaagatttggacaccggacactttcttcaggaattcc
aaaaagtcaatttcccacaacatgaccactcccaacaaactgttccgtattatgcagaat
gggacagtcctctacaccatgagactaactatcaatgcagagtgtccaatgaatctcatg
gatttccccatggacggccactcctgtcctctcagatttggaagttatggattcaccagc
agtgaaattcgtttcacctggagaaaagggctaaaatcatctgttgagtgccccaaagag
tcaatgagtcttctgcagtatgatcttgtgggacagactttgtccagcgagacactgaag
tcgagcacaggtcactactctgtgcaggtggtccatttccacctgcagaggaagcttggc
tactacctcatccagacctacatccctcttataatggtcgtcgtattgtcacaagtctca
ttttggatcaacaaagagtcagttcctgcacgcacagttgctggcatcaccacagtgctg
accatgaccaccttgagcatcagtgcccgccagtctttgcccaaagttgcctacgccaca
gccatggattggttcatcgctgtgtgttttgcctttgtggcgttcgctctcgttgaattc
gcagcagtgaactactttgccactttgcaggcaaaccgcttaaagaaggaaaaagccaga
caagacagactggaggtgctggctgctggcagcgaggacgatgacacgatttcgatggac
agcagccttcaggaaggcctgaagaagaggaaccactccatgagcaacaacgtgcctcac
ctgctcattttcctccagcagggttcggctgttcctcagttcccacagctggcaggaacg
agccggatcgacgtctacgcccgtgtcctcttccctctgacctttgccctcttcaacttg
gtttactggtacatctacctgaccaaggacaccacgccaggggtcgacgagacatccgac
cttcacagggacccctcggtcactttaaaccccaaccgctgcacggcgacttctcaagtc
gagacagtcgctgccacacaagcaaaggatgctcagaggcacgctcagagaccgagaact
gcatctgaaaaagacggagatgatataatctgtgatggctgtaactggtggtga
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