Nematolebias whitei (Rio pearlfish): 119408611
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Entry
119408611 CDS
T08042
Symbol
slit3
Name
(RefSeq) slit homolog 3 protein
KO
K06850
slit 3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nwh00536
]
119408611 (slit3)
Glycosaminoglycan binding proteins [BR:
nwh00536
]
Heparan sulfate / Heparin
Axon guidance molecules
119408611 (slit3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRRNT
LRR_9
LRRCT
EGF_TEN
hEGF
LRR_14
JAG1-like_EGF2
EGF_DL_JAG
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
119408611
NCBI-ProteinID:
XP_037531385
LinkDB
All DBs
Position
4:complement(33021..655941)
Genome browser
AA seq
1461 aa
AA seq
DB search
MLPAEPERCAGLCRTGLLLLALLLCAASVRGCPHKCSCSGSHVDCQGLGLKTVPKGIPRN
AERVDLNKNNITRITKVDFSGLKNLRILHLEDNQICVVERGAFQDLRLLERLRLNRNKLQ
ILPELLFQSNPKLGRVDLSENQIQAVPRKAFRGIINVKNLQLDNNHISCIEDGAFRALRD
LEILTLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCHLSWLSDWLKARRGLAPFTQC
MSPAHLRGLNVPDVQKKDFICNGVAQTESRVCVPQVAVCPPTCTCNSNIVDCRRKGLTDI
PANLPEGIVEIRLEQNLIKSVPPGAFSAYNKLKRIDLSKNQISDIAADAFSGLRSLTSLV
LYGNKITELPKGIFDGLLSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISNG
LFSPLRSIKTLHLAQNPFICDCHLKWLADFLFDNPIETSGARCSHPRRLANKRISQVKGK
KFRCSGQEDYHSRLSGECFQDLVCPEKCRCEGTVVDCSNLKLTRVPTHIPEHTTDLRLND
NEMTILEAAGTFKKLPNLKKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLTGLQGRMF
KGLSGLKTLMLRSNQIGCIDNGTFTGLSSVRLLSLYDNKIASITPGAFSTLHSLSTINLL
SNPYFCDCQMAWLGRWLKKTRVVSGNPRCQKPAFLKEIPIQDVATPDFTCDGAEDNGCLP
ASGCPDVCLCSDSVVRCSNRGLHTLPKGIPKDTMEIYLEGNMLTSVPKELAALKQLSLVD
LSNNSINTLAPYTFSNMTQLATLILSYNQIRCIPVHAFDGLKSLRLLVQAKLFLTSVCAK
YRVFVRSLWNWKKSTAIINIFSIFSTCAIQGQDCEIPMNACIGFPCFNGGTCHLQPSQKD
HFNCVCLPGFEGQRCEVNPDDCEDNDCENNSTCVDGVNNYTCICPPNYTGDLCDEVVDPC
IGTFNPCQHDSKCVYFGRSYRCECLPGYVGQHCEQDYNDCLENKCQHGAECVDAVNGYTC
VCKEGFSGLFCENPPPMILLQTSPCDHSDCQNGAQCLMVAREPICRCIPGFYGNKCDKVS
TVHFLSQDGYVALPGTKLRPRAHISLQVATAKDYGILLYKEDHDPLALELYQGHIRLIYG
IASYLPTTVYSVESVNDGLFHTVELLIQNRSLSLVVDNGAPKSLGKLARQPSVDHNTQLY
IGGVPSQVMTSSLHQAPERSHQAFDGCIHNVQINGETQDLSFMSTGRGQLHGMESKGDSI
LVGCHSCSVCAQGTCREAGEMGVTCDCPPGSSGALCDQTMVPIPCQNNRCVHGLCVIKGQ
SYSCQCNEGYQGQYCDRQREPPACRGHHCGRGECHISERGEPVCHCQPDYTGPTCDAELT
CRGEMVRELIKRHQALRTCTSTSKIPRMDCLRSCQASAPRGICCGITKTRLRKVVFHCTD
GTSYSEEMEIALECGCSRCSL
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgcttccagccgagccggagaggtgcgccggcctctgccggaccgggctgctgcttttg
gctctcctgctgtgcgcagcgtccgtgcgtggatgccctcacaagtgcagctgctccggg
tctcatgtggactgccagggtctgggtctgaagactgtccccaaaggaatcccgaggaat
gccgagcgcgtagacttgaacaaaaataacatcactcgaatcactaaagtggacttctct
ggcctcaagaacctcaggattcttcatctggaggacaaccagatctgtgttgtagagagg
ggagccttccaagaccttcgactgctcgagaggcttcgtctgaacagaaacaaactccag
attctcccggagcttctcttccagtccaaccccaaactgggccgagtagacctgagtgag
aaccagattcaggcagttccaagaaaagctttcagaggaatcataaatgtcaagaaccta
caactggacaacaatcacatcagctgcattgaagatggagctttccgagcactgcgtgat
ctggaaattcttaccctcaacaacaacaacatcaccctcatccccctgtccagcttcaac
cacatgcccaagctgcggacactgcgtttgcactccaacaacctccactgtgactgtcac
ctgtcatggctctctgattggctcaaagccaggcggggcttggcccccttcacccagtgc
atgtctcctgcccacctgagagggctcaatgttccagatgtgcagaagaaagattttatc
tgtaatggtgtggcacagacagagtcaagggtgtgcgttcctcaggtagctgtgtgtcca
ccaacctgcacctgcaacagcaacattgtggactgtcggcggaaaggcctcacagacata
ccagcaaacctcccagagggcatcgtggaaattcgtttggagcaaaacttgatcaaaagt
gtcccaccaggagccttttcagcctacaataaactcaagagaattgatctgagtaagaac
cagatttctgacattgctgcggatgcttttagtggtcttcgttcactcacttctctagtg
ctgtatggcaataagatcactgaactgcctaaaggaatatttgatggactactttcactg
caacttctactgctgaatgccaacaaaataaactgtctgagagtgaacaccttccaagac
ctgcagaacctcaacctgctgtctttatatgacaacaaactgcaaaccatcagtaatggt
ctcttcagtcctctgcgctccatcaagacactccatctggctcaaaaccccttcatatgt
gactgtcacctgaagtggctggctgatttcctgtttgacaaccccatagagacaagtggg
gctcgctgcagccaccccagaaggctggctaacaaacggatcagccaggtcaaaggcaag
aagttcaggtgctcaggtcaggaggactatcacagccgcctgagtggcgagtgttttcag
gacctggtctgtccagagaaatgtcgctgtgaaggcacagtggttgactgctccaatctc
aaactgactcgagtacctacacatatccctgaacacaccactgacctgcggttaaatgac
aatgaaatgaccatcctggaggctgcagggacttttaagaagcttccaaacttgaagaag
attaacctgagtaacaataagctgagagacattcgtgaaggtgcatttgatggagcaggt
ggagttttggagctgctgctaacggggaacaagctaacgggactgcaaggacgcatgttc
aaaggcttaagcggcctcaaaactctcatgctgcgcagtaaccagatcggctgcattgat
aatggcacattcacaggtttgagctccgtccgtctgctgtcactttacgacaacaagatc
gccagtattacccccggagccttctccactctccactccttatctaccattaatctgctc
tccaacccatatttttgtgactgtcaaatggcctggttgggccggtggctgaagaagaca
cgggtggtgagtggaaaccctcgctgtcagaagccagccttcctaaaggagattcccatc
caggatgtggccaccccagacttcacgtgtgatggtgctgaagataatggttgccttcct
gcatctggttgtcctgacgtctgcttgtgctcagacagtgtggtgcgatgcagcaacaga
gggctgcacacgctacccaaaggcattcccaaggacaccatggagatatacctggagggt
aatatgctgacatctgtgcccaaagagctggcagcccttaagcagctgtcacttgtagac
ctgagcaacaatagcatcaacacgttagctccatataccttcagcaacatgactcaacta
gcaacactcatcctgagctataaccagattcgctgcatcccggttcatgcctttgatggg
ctcaagtcacttcgcctgctggttcaggccaaactttttctcacaagcgtatgcgccaag
tatcgtgtgtttgtcagaagtttgtggaattggaagaaaagcacagcaattattaatata
ttttccatattttccacttgtgccattcagggtcaagactgtgagattcccatgaacgca
tgcatcggcttcccttgctttaatggaggaacctgccatcttcaacccagccagaaagat
cactttaactgtgtgtgtctacctggttttgaaggtcaacggtgtgaggtaaacccagat
gactgtgaagacaatgattgtgaaaataactccacgtgtgtagatggggttaacaactat
acctgcatctgtccacctaattatacaggtgacctgtgtgatgaggtggttgacccttgt
attggtactttcaacccatgtcagcatgactccaagtgtgtctattttggccgcagttac
aggtgcgagtgtttaccaggatatgtgggccaacattgtgagcaggactataatgactgt
ttagagaataaatgtcagcatggggcagagtgtgttgatgctgtcaacggctatacttgt
gtttgcaaagagggtttcagtgggctgttctgtgagaaccctccaccaatgatcttgctg
cagaccagcccatgcgaccattcagattgccagaatggtgctcagtgcctgatggtagcc
agagagcctatctgccgctgcatacctggtttctatggcaataaatgtgacaaagtttcc
actgttcacttcctgagtcaggatggttatgtggcgttaccaggcaccaagctccgccca
agggctcatatttcattgcaggtggctacagctaaagattatggaattttgttatacaaa
gaggaccatgacccgctggccctggagctttaccaaggacatatacgactcatttatggc
attgctagctacctaccaactacagtgtacagtgttgagtccgtcaatgatggacttttt
cacacagtcgaactgttgattcagaatcgctcgctgagcctggtggttgataacggcgca
ccaaagagcctgggcaagctagcacgccagccctcagttgaccacaacactcaactttac
ataggaggtgtaccatcccaggtgatgacttcaagtctacatcaagcccctgagcgctcc
catcaggcatttgatggctgcattcataatgttcagatcaatggagagactcaagacttg
agttttatgtcaacaggaagaggacaattgcatggcatggaaagcaagggtgatagcatt
cttgttggatgtcattcctgtagtgtctgtgcacaaggtacctgcagagaggcaggagaa
atgggggtcacttgtgattgccctccaggtagcagtggggctctttgtgatcagacaatg
gtccctattccctgtcagaacaacagatgtgtccatggtctatgtgtgataaagggtcag
tcctatagttgccaatgtaatgaaggctaccagggtcagtactgtgatcgacaacgggag
cctccagcctgcagggggcaccactgtggacgaggggagtgtcacatatcagagagagga
gaacctgtctgccactgtcaaccagactataccggaccaacctgtgacgcggagctcact
tgccggggtgaaatggtgagggagctgataaagcgccaccaagccctgagaacatgcacg
tctactagcaagattccccgtatggactgcctgaggtcctgtcaggcatcagcaccccgg
ggtatttgctgtggcattaccaaaaccagattgagaaaggtggtgttccactgcactgac
ggcacctcgtattcagaagagatggaaattgctctggaatgtggctgctccagatgttca
ttgtaa
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