Nematolebias whitei (Rio pearlfish): 119408647
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Entry
119408647 CDS
T08042
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor NF-kappa-B p105 subunit-like
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04010
MAPK signaling pathway
nwh04210
Apoptosis
nwh04218
Cellular senescence
nwh04620
Toll-like receptor signaling pathway
nwh04621
NOD-like receptor signaling pathway
nwh04622
RIG-I-like receptor signaling pathway
nwh04623
Cytosolic DNA-sensing pathway
nwh04625
C-type lectin receptor signaling pathway
nwh04920
Adipocytokine signaling pathway
nwh05132
Salmonella infection
nwh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119408647
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
119408647
04218 Cellular senescence
119408647
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119408647
04621 NOD-like receptor signaling pathway
119408647
04622 RIG-I-like receptor signaling pathway
119408647
04623 Cytosolic DNA-sensing pathway
119408647
04625 C-type lectin receptor signaling pathway
119408647
09152 Endocrine system
04920 Adipocytokine signaling pathway
119408647
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119408647
09171 Infectious disease: bacterial
05132 Salmonella infection
119408647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119408647
Transcription factors [BR:
nwh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
119408647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Ank_2
Ank
Ank_3
Ank_5
Ank_4
Death
DDE_3
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
119408647
NCBI-ProteinID:
XP_037531417
LinkDB
All DBs
Position
4:complement(9132213..9164585)
Genome browser
AA seq
987 aa
AA seq
DB search
MAGDDHYLHPSTQMFDNIMIDSSWEFPTFSAMPQTVSVRTADGPYLQILEQPKQRGFRFR
YGCEGPSHGGLPGASSEKNRKTYPTVKQDSAPAHPAKVTNSWFVDRPANSPDLNPVENLW
AIVKRKRTLHYSNIFLTLLFSKDCKTAASASSTIRLLMLSAGEKTRAANYCCRLHNMRLL
QAARRPQVQEGNQPVPSDTLQHLLEDPSFPNLGILHVTKKNVAKTLEERMTEALRMGYNC
GISIHSEIDSLQGEVRVPRELTDHQRNIISIAAANQSKDMDLSVVRLMFTAFLPDSDGGF
SRRLEPVVSEPIYDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEE
DDTGLTWEAMGDFSPTDVHRQFAIVFKTPKYRDQNLQKPTSVFVQLKRKSDNETSEPKPF
TYHPQIIDKEEVQRKRQKTLPNFHDFSGHGGGGGVYRGGGPATGGGPGSGGGYYQGFTSY
NYGGGGGGGGGGGGGFSTGYSTGLGGGGGIKQASNSDAKDDDDSDTGDDSTSEVPRASAQ
PGDREVGERADEGGGDVEPETDGEEQFVEATRRQLDALFQYSVTGDSAYLLAPQRPLMTR
RTRTETPGFTLQFCTASRALKSLAQVVLALPGGEVLNVRNHLYQTPLHLAAITQQKEAVE
ALLLAGADPTLTDRHGNTVLHLAALQEGGMVSLILQHREMRGLLQSCNTAGMCAIHLAVL
ANRLSSLRELLEGGADVEVQERSCGRTALHLATETDNVSLAGCLLLEGNAKVDCCTFNGS
TPLHIAAGRGSVKLTALLMAAGADPQRENFEPLFFREEEECDEDDEGYIPGTTPLNMATS
SEVLDLLNGNEYEPKPPHQTHAPPQGDLVSLGVEVKQKLCGALESEGCWESLAHSLGLGI
LNTAFRLSPSPTKTLLDSYEVSGGTVSDLLAALRSVGGCKAVRVLEEALCDHPESSDGSR
GAPDQDLKVDVQIDSYACDSGVELSTA
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggccggagacgaccactacctccacccttccacccagatgtttgacaacatcatgatc
gattcttcctgggagtttccaactttctctgcgatgcctcagacggtgtctgtgcgaaca
gcggacggaccgtacctgcagattctggagcagcccaaacagcgcggcttcaggttcagg
tacggctgcgagggtccgtcccacggcggcctgccgggagcctccagcgagaagaacagg
aagacgtacccgaccgtgaagcaggactcggcgcctgcccatcctgccaaagttaccaac
agctggtttgttgaccgaccagcaaactcgcctgacctgaaccctgtagagaatctttgg
gctattgtcaagaggaagaggactcttcactatagtaacatcttcctcaccctgctcttc
tcaaaggactgcaaaactgctgctagcgcttcctctaccatcagacttctcatgctgtct
gctggagagaagacgagagctgcaaactactgctgcagacttcacaacatgcgcctgctc
caggccgctcggaggcctcaggtccaggagggaaaccaacctgtccctagcgacactctg
cagcacctcctggaggatccaagttttccgaacctggggatcctccacgtgacgaagaag
aacgtggcgaagactctggaggagaggatgacggaggcactcaggatgggctacaactgc
ggcatctccatccactcagagatcgacagtctgcagggggaggtccgagtcccacgagaa
ctcacagaccatcagcgcaacatcatcagcatcgcagcagccaaccagtcgaaagacatg
gacctgagtgtggtccggctcatgttcacggcgttcctccccgacagcgacggaggcttc
tccagacggctcgaacccgtggtttctgagcccatctacgacagcaaggctccaaacgct
tcaaacctgaaaattgtgcggatggatcggaccgccggctgcgtgaccggaggagaagag
gtctacctgctttgtgacaaagtccagaaagatgacattcaggtgcggttttacgaggag
gatgacacggggttgacctgggaagctatgggagatttctcccccacagacgtccacaga
cagtttgccatcgtcttcaagactccgaaatatcgagaccagaacttgcagaagccgacg
tccgtgttcgttcagctgaaaaggaaatctgacaacgagaccagcgaacccaaacccttc
acctaccatcctcagatcatagacaaggaggaggtgcagaggaaacgtcagaagacgtta
cccaacttccacgacttcagtggtcacggaggaggaggaggagtgtatcgaggaggaggt
cccgctacaggaggaggtcctggatcaggaggaggttattatcagggctttacttcctac
aactatggaggaggaggaggtggaggaggaggaggaggaggtggtttctccacaggatac
tcaactggtttggggggaggaggaggcatcaagcaggcctcgaacagcgatgccaaagat
gacgacgacagtgatacaggcgatgactcaacgtcggaggttccacgagcttcagctcag
ccaggagaccgggaggtgggggagagggctgatgagggaggaggcgatgtggagccagaa
acagacggagaggagcagtttgtggaggcgacccgcaggcagctggacgctctcttccag
tattcggtcacaggtgattcggcgtacctgctggctccacagcgccccctcatgacacgc
aggacgaggacggagacaccgggcttcaccttgcagttctgcacagccagcagggcgctt
aagagtctggctcaggtggtgttggctctgcccggaggggaggtgctgaatgtgaggaac
cacctgtaccagactcctttgcacctggcggcgatcactcagcagaaggaagcagtggag
gccctgctgttagccggcgcagacccgactctgaccgatcgtcacggcaacacggtgctg
catctggcggcgctgcaggaaggtgggatggtgtctctgatactgcaacaccgagagatg
agaggacttcttcagagctgcaacactgcaggtatgtgtgccatacacctggcggttctg
gccaatcgactgtcttccctcagggagctgctggagggcggggctgatgtggaggttcag
gagcgcagctgtgggcggaccgccctccacctcgccacggagaccgacaacgtgtcgctg
gccggctgcctactgctggagggaaatgccaaggtggactgctgcacctttaatggctcc
accccccttcacatcgccgcggggcggggctccgtcaagctgacggctctcctgatggct
gcaggcgctgaccctcagcgggagaactttgagcctctgttcttcagggaggaggaggag
tgtgatgaagacgatgaaggctacatccctggaacaactcctctcaacatggccaccagc
tctgaggtgttggacctcctcaacggtaatgagtacgaaccaaaaccccctcatcagacc
catgccccacctcaaggtgacctggtgagcctgggtgtagaggtgaagcagaaattgtgt
ggcgctctggagagtgaaggatgctgggagagtctggctcacagcctcggcctcggcatc
ctcaacacggccttcagactgagcccctcccccaccaaaacactgctggacagctacgag
gtctctggtggaaccgtctcggacctgctggctgctctcaggtccgtgggcggctgcaaa
gcggtgcgcgtcctggaggaggcgctgtgcgaccacccggagtcgagcgacgggtctcgg
ggcgctccggatcaggacctgaaggtggacgtacagatcgacagctacgcttgcgacagt
ggggtggagctttccacggcgtag
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