Nematolebias whitei (Rio pearlfish): 119408665
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Entry
119408665 CDS
T08042
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nwh00536
]
119408665
Glycosaminoglycan binding proteins [BR:
nwh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119408665
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
119408665
NCBI-ProteinID:
XP_037531471
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Position
1:33716395..33771116
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AA seq
352 aa
AA seq
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MMQKCALSPHREIRVKRDHPGLQGHLALLDQEALLGTPERMDPEGDPGQLGETGPMGPEG
PQGPTGFLGPPGVPGVDGLKGDVGIPGLDGIPGSKGEKGDMGEKGDMGEDGPKGDMGEKG
DAGSSAAGIKGEPGEPGRSGVKGEPGLPGLPGLPGIKGEPGFLGPQGEPGLPGLPGTKGE
KGDHGPPGKGERGEIGPVGSKGSQGEAGLPGSKGSKGETGDKGDLGSVGPRGPPGQKGDR
GATEIIDYNGNIEEALQKITTITVTGPPGPPGPMGPQGIKGDRGLPGLPGLDGERGYKGS
KGDMGMPGASGEKGTTGLPGLPGVNGAKGDKGDAGLPGPQGPSFVSNVATLM
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagaaatgtgctctttcgccacacagggagatcagggtcaagcgggaccacccg
ggcctccagggccacctggccctcctggaccaagaggccctcctggggacaccggaaagg
atggacccagagggtgatccagggcagttgggagaaacaggacccatggggcctgagggg
ccacaagggccaacggggtttcttgggcctccaggtgttccaggtgttgacggactgaag
ggggatgttggcatcccaggactggacggtattccagggtccaagggtgaaaagggagac
atgggtgaaaagggcgatatgggagaagacggacccaaaggtgacatgggggagaagggt
gatgctggctcctctgcagcaggtatcaagggcgaacctggagagcctggtcgaagtgga
gtaaagggagaaccaggactaccagggctgcctggactcccaggaataaagggcgagcct
gggtttttgggcccccagggagaaccggggcttccaggactcccgggaactaagggggag
aaaggcgaccacggaccacctgggaaaggtgaacgaggggaaatcggacctgtcgggtca
aagggttcacaaggagaagctggtctgcctggttccaaagggtcaaagggggagactgga
gataaaggagacctgggatctgttggcccaaggggcccgcctgggcagaaaggagaccga
ggagcgactgaaatcatcgactacaatggaaacatcgaagaggccttacagaagataacc
accattacagtgacgggtcctcctggtccacctggaccgatgggaccacagggaataaag
ggggatcgtggtttgcctggtctccctgggctcgatggagaaagaggctataaaggttcc
aagggagacatgggaatgccaggggcctctggggagaaaggaaccactggtttaccaggc
ttacccggtgtcaatggggcaaaaggagataaaggagatgcaggactacctggcccacaa
ggtccatcttttgtctctaatgttgctaccctcatgtga
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