Nematolebias whitei (Rio pearlfish): 119408666
Help
Entry
119408666 CDS
T08042
Name
(RefSeq) uncharacterized protein LOC119408666
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119408666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119408666
Membrane trafficking [BR:
nwh04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
119408666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
119408666
NCBI-ProteinID:
XP_037531436
LinkDB
All DBs
Position
4:11771860..11786618
Genome browser
AA seq
1442 aa
AA seq
DB search
MMSLIDLDDDQRWVPTHVNVTVLRARGLRTKGKHGSRYLYTIIQVGKEKYTTGLVEKAEM
PAWNEECCFELLPGILETGGRSAYPPGSGDLVLTVMHRVLIGLDVFLGQTIVPLDKIFQD
GLCPREEWFKLNSKAGRKEKERGALQVTVQFTRNNMTASMFDLTMKDKPRSAFGKLKDRV
TGRKRGDVESSSAIVPGRYAALSGSVGQPFGEEGMVESQGVEIPEEKKSKMKDFFKGRMR
KSSDTRSCSSLASESSMSSMASDNLGPPPSLDLLSDPPSSPIYTSKVRVDTHYGETDLAK
KVLTSQHTTKILTHKRAFSDEASKITTAFPRTNAAVESLKGRTMTQSKSSLCINGSHVYD
SEPSTPKSSGALQSKLVLLEKCSPLSRSLQNLTKRSEDKGSFAEGRRWSFDKLKKEEEEK
EDQASSGPALEAQPGDRPVQAAVQIVSSAGSSPDKGRKLRKTLFSTGRSDSLPSKSDLNQ
AGSASEGKFRGWFGSSDPQNKPRLEVSPKVESSSDVPPSLSPCSPVPPQCSHPSTSPSSQ
VLPDDHSHISPFTPSSSPSSTPLSPSNPFLPCIQRNPFFEELVAEESEMSSVAPCSSSGS
PLLLYTTLPAQLCTPSSDIKVSATNRVSLKRERPRPVAKQISLPALSPSEATADFPNHSA
PCSASGNAENWDDSFDAFASSRLNSPKARFPPEQPRASPTLCCKRSYHPLDDFGCNYAQE
TRTCKDEPPPLPPRRLLRTPVNEIFSDGWLHRGQELAVHKEAYLLSQTGVASLQRGRESE
SKRNSFSPDPQTSSDSLSAHTQPHTDSKSLGCTSEGRLQKFKYEPLEDETNCWGGMLFEQ
DLYGRVCRRVTTYGQQRVNTHHFSLNAEEIACDKTLVKNASKRLFDNDRCVGDLYSVPSI
TPSKVPDISYTPAEEMKETNLCETSCLNNNISFSLTLGDLNMNVNNSDFSFIDSDGSPQS
EAVGIDKSIDNSNGTFPTEHPPAEIYYKETQAEDMFTLKDTYIPAMNSSFEITMSSRKMC
KVPPVCKDNCHDCRHELNNVASHDHSKENSKSIAATISQNPTFNLLDIKTECREELIGSD
GDFNGNLEDKLVKPSQTESYSGVVSARIRPKGLSRQSSSDSTSSQSRYTDRDFEQFLSLV
QNLSEVSEGPSSYQPSKSVLSSLQALELTDVLKVCPVSENTHQSVSKTQSHMCSKEHTAS
HVEEQTSGMSFEDLHAKVAPSCRTPSKTKIGESLQEPQLCCPPTPSAPACCPLIHPPVTG
LGGGAGSSVTGSCTPSFSTTFSSDQLLVDARHSLLPEETQPASSLPHQESRSHPVKPLTT
SQSEKKESRSVLEKLKSTINPGRSAHQAAPEPEKSQEVSADRAAQYQHLTNMELISLLLQ
QEMDLQKQQAASDQQGAQLEKCEAELKKVKLQVRDLEDYIDNLLLRIMEQTPTLLQVRSR
HK
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcattaatagatctagacgatgatcagaggtgggtgcccacgcatgtcaatgtc
acggtcctccgcgcgaggggactgcgcaccaagggcaagcacggcagccgctacctctac
accatcatccaggtggggaaggagaaatacaccacggggctggtggagaaggcggagatg
cccgcgtggaacgaggagtgctgcttcgagctgctgcccgggatcctggagaccgggggc
cggagcgcgtacccgccggggagcggggacctggtcctcaccgtcatgcaccgggtgctc
atcggactggacgtgtttctgggtcaaaccatcgtccccctggacaagatattccaggac
ggattgtgtccaagagaggaatggttcaagctcaactccaaggcgggaagaaaagagaag
gaacgtggtgcgcttcaggtgacggtccagttcacccgcaacaacatgacagccagcatg
ttcgacctcaccatgaaggacaaacctcgctccgcgttcggaaagctcaaggatcgcgtc
acggggaggaagaggggggacgtggagtcctcctccgccattgtgccgggacgctatgcc
gccttgtcagggtccgtggggcagccgtttggagaggagggtatggtggagtcacagggt
gtggagataccagaggagaagaagagcaagatgaaggacttcttcaaaggaaggatgcga
aagtcatccgacaccaggtcatgctcatcgctggcttcagagagtagcatgtcttccatg
gccagcgataaccttggccctccgcccagtctggatctgctgtcagacccccccagctcc
cccatctacacaagcaaagtgagagtggacacccactacggagaaacagacttagctaaa
aaagtgctcaccagccagcacaccacaaagatcctcacacacaagcgggccttcagcgat
gaggccagtaagatcacaacggctttccctcgaacaaatgctgcagtggagtctctcaag
ggtcgcaccatgactcagtccaagtcctctttgtgtataaacggtagccacgtttacgat
tcagagccttcgactcccaaaagctctggagcgctccagtctaaactggttctactggag
aaatgctcaccgctgtctcgctctctgcagaaccttaccaaaagaagtgaggacaaaggt
tcctttgcagagggccgacgctggtcctttgacaagttgaagaaagaggaggaagaaaag
gaggatcaggcgtcgtctggtccagctctggaagctcagcctggggaccgtcctgtgcag
gctgcggtgcagattgtctcgtcagctggaagttcacctgacaaaggaaggaaattaaga
aagactttattctctacaggaaggagtgattctcttccatctaagtctgaccttaaccag
gctgggtctgcatctgaggggaagttcagaggctggtttggctccagtgacccccagaac
aagccaaggctggaagtttctcctaaggtagaaagcagctcagacgtacccccttccctc
tctccttgctcccctgtgcctccccagtgctcccatccctccacttccccttctagtcag
gtcctacctgatgaccacagtcacatcagtcccttcactccttcctcttccccatcgtca
actcccctctctccttcaaatcccttccttccatgtattcagcgcaaccccttttttgag
gagctcgtagcagaagagtcagagatgtcctctgttgcaccatgctcctcgtctggctcc
ccacttctgctttacaccaccctgcctgctcagctctgcacacccagttctgatattaaa
gttagtgccacaaatagggtttccttaaagcgggagcgccccaggccagtagctaagcag
atatcactccctgcgttatcaccctcagaagccacagctgacttccccaatcactccgcc
ccttgctctgcatctggaaatgcagagaactgggacgactcatttgacgcctttgcctca
agcagactcaactcccctaaagctagattccctccagaacagccaagagccagcccgact
ttatgttgtaaacgtagttaccatccgcttgacgactttggctgcaactatgcacaagaa
actcgaacatgcaaagacgagcctccgcctttacctccgaggagacttttgagaactccg
gtgaacgagattttctcagatgggtggctgcatagaggccaggagctggcggttcataag
gaagcctacctcctgtctcagactggcgtggcctcgctacagcgtggaagagagagcgaa
tccaaaagaaacagtttttcccctgaccctcagacaagcagcgactccctcagcgctcac
acccagccgcacacagacagtaaatctcttggatgcacgtctgaagggaggctccaaaag
ttcaagtatgaacctctggaagatgaaaccaactgctggggagggatgttgtttgagcag
gacctctatgggcgtgtgtgcagaagggttacgacttacggacagcaaagagtaaatact
catcacttctcactgaatgctgaggaaatcgcttgtgataagaccctggtcaagaacgca
tctaaaagactctttgataatgacagatgtgttggcgacctctacagcgtgccatccatt
actccctccaaggtaccggacatttcttacactccagcagaggagatgaaagaaactaac
ttgtgtgaaacttcatgccttaacaacaacatatcgttctcgctaacgctcggagatctg
aacatgaacgtaaacaactcagactttagttttattgattctgacggatctcctcaatca
gaggcagtgggtattgacaaaagcatcgacaattcgaacgggacttttccaacagagcat
ccaccggctgagatctactacaaggaaacccaagctgaggacatgttcactttaaaggac
acctacatacctgcaatgaactcctcttttgaaataactatgtcttctagaaagatgtgc
aaagtgcctccagtttgcaaagacaactgccacgattgccgacacgaactgaacaatgtt
gcttcacatgatcacagcaaggaaaatagtaaaagtattgctgctaccatttcacaaaac
ccaacatttaatttgttagacattaaaactgagtgtagagaagaactcataggaagtgat
ggtgatttcaatggaaacctagaagacaagttagtcaaacctagccagactgagtcatat
tcaggggttgttagtgcacgaatacgaccaaaaggattgtcccgacagagcagcagtgac
agcacaagcagccaaagcagatacacagacagagactttgagcagtttttatctctcgtc
cagaacctttcagaagtcagtgaaggaccttcatcttatcagccctctaaatcagtcctg
tcctccctacaagcattagaactgacagatgtgcttaaagtttgccccgttagtgaaaac
acacatcaaagtgtgtctaaaactcaatcacacatgtgttcaaaggaacacacagcatca
catgtagaagaacagacctctgggatgagttttgaagatctccatgcaaaagttgcaccg
agctgcagaaccccctccaaaacaaagattggggaatctttgcaagagcctcaactctgc
tgtccccctaccccttctgcccctgcctgttgccccctcatacatcccccagtcacgggg
ctcggtggtggagctggctcctctgtgactgggtcctgcaccccctccttctccaccacc
ttcagctctgaccagctgctggtcgatgcacggcactcacttttacctgaggagacacag
cctgctagcagcctgccccatcaggagagcagatctcatccagtgaaaccattaacaacc
agccagtctgagaagaaagagagtcgttcggtcctcgagaagctaaaatctaccataaac
ccgggacgctccgcccatcaggccgcacctgaacctgagaagagtcaggaggtgagtgca
gaccgagctgctcagtaccagcacctcaccaacatggagctgatctccctgctgctgcag
caggagatggacctgcagaagcagcaggcagcctctgatcagcagggtgcgcagctggag
aaatgtgaggccgagctgaaaaaggtcaagctgcaggttcgagacctggaggactacatc
gataatctgctgctgcggatcatggagcagacgccgactctgcttcaagttcgctcaaga
cacaagtga
DBGET
integrated database retrieval system
