Nematolebias whitei (Rio pearlfish): 119408670
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Entry
119408670 CDS
T08042
Symbol
vimr2
Name
(RefSeq) vimentin
KO
K05640
glial fibrillary acidic protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119408670 (vimr2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119408670 (vimr2)
Membrane trafficking [BR:
nwh04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
119408670 (vimr2)
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
119408670 (vimr2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
FlaC_arch
IFT57
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
119408670
NCBI-ProteinID:
XP_037531439
LinkDB
All DBs
Position
4:14249268..14269381
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AA seq
372 aa
AA seq
DB search
MAMLRVSSYRKMFEDDRWSRSGGLSAACAGQYRASVRGAASDRCGCEQLNFEAAEALNKE
GLQRFVQERTSIAALNDRLVKLIELAHRLEEENDCLERQIAEEKLNSISFSITSAAEKPD
YSLEAVVGKLRKQKDEILLDTKELKEELEHLLREYEKAAHQRILIQQDQQDVSEEVDAET
AECLALREQVGIYEEQLANMEAQHKLEVEGLLRPDERALKVAAIRFGSPDITPALDVKEY
YCQLAESLQFECDASSSAAMRKSDGKKLEVGGIAGSKVKDLPEMNDASEMNAVISGLQNE
LSELEKCNQELEDEVETKMAVYEGEVEELECAVDEIKQQEADLKAQMKEQCEANKTLLSE
RMARDMEIAAYR
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctcagagtctcttcttaccgcaaaatgtttgaggacgacaggtggagtcga
agtggagggttgagtgcggcgtgtgcaggacagtaccgggcctctgtcagaggtgcagct
tcagacaggtgtggttgcgagcagttgaacttcgaagctgccgaggctctgaacaaagag
ggtttgcagcggtttgtccaggagcgcacctctatagctgccctcaacgaccgcctggtt
aaactcattgaactggcccatcgtttggaagaggagaacgattgtctggaacgtcagatc
gcagaggagaagttgaacagtatttccttcagcatcacctcggctgcagagaaacctgac
tacagtttggaagcagtggtgggaaaactgcgtaaacagaaggatgagattcttctggac
acaaaggaactaaaagaagagcttgaacatttgttgagagagtatgagaaggccgcacat
caaaggatcctcatccagcaggatcagcaagatgtttcagaggaagtggatgctgagaca
gcagagtgcttggctctgagggagcaagttggtatctatgaggaacagctggccaacatg
gaggcccagcacaagttggaagtggaaggtctgctgaggccagatgaaagagctctgaag
gtagcggcgattagatttggcagccctgacatcactccggccttggatgtaaaggagtac
tactgccagctggctgagagcctccagttcgagtgcgatgcatcctcctctgctgcgatg
cgtaaaagtgatggaaagaaactggaagtgggaggaattgcagggtcaaaggtcaaagac
ctgccggagatgaatgacgcgagtgagatgaacgcagtgatttcggggctgcaaaacgag
ctctccgagctcgagaagtgtaatcaggaactggaagacgaggttgagactaagatggct
gtgtacgagggtgaagttgaagagttggagtgcgctgtagatgaaatcaagcagcaggag
gctgatctcaaggctcagatgaaggagcagtgtgaggcgaacaagacactgctcagtgag
aggatggcgagagacatggagattgctgcttacaggtga
DBGET
integrated database retrieval system
