Nematolebias whitei (Rio pearlfish): 119408715
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Entry
119408715 CDS
T08042
Name
(RefSeq) protocadherin-10-like
Organism
nwh
Nematolebias whitei (Rio pearlfish)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
ELL
Motif
Other DBs
NCBI-GeneID:
119408715
NCBI-ProteinID:
XP_037531484
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Position
4:20738558..20749282
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AA seq
725 aa
AA seq
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MAPRIKYVNTRSLLLALLCLSAWTAAQISYTVSEEADKGAAVGNLAKDLNLSVQQLHSTT
LHITSGYKKQYFDINHESGVLFVSDRIDREELCPNVVKCSLNIEATVNHPRSLHRIEVLI
NDINDNAPTFLEDIITVDMFESSYVGEKHPLPVAYDADEGSNSIRTYKLNPNEYFSLDVQ
NTGDQSVSAELVLQKVLDRETEAVIELVLTAVDGGTPPKTGTLQIKVNVLDVNDNPPLFS
KPLYKVQVMENANIGAVLLTLTATDSDEGVNGQIEYYFTERARLNHLETFSINNNSGEIT
VKGTIDYEENQAFELRVQARDKGTPPRSAHCKVLVEVLDANDNAPEISVSSLMSPVKENA
EIGTAVAMVTITDKDGGKNGFTICKIKDSVPFKLKSNYKNYYSILVDGPLDREHVSSYEI
HVEAKDEGTPALSSSAKITIQISDVNDNPPQFTDSLISVYVKENSQTGTTIHKLTTTDLD
LGENAKSIYRLINGSPKSPQITVNSETGDIVSLQSFNHEELKTFQFQIASSHSGSTWWVV
IIGALYLLKEPSVLWHLTAIKLRRLSRKITDTDTMAIRRYRLRSEKLSSFIGTHVPIKED
SFSDLNLHLLIAIVSVSVIFLLSLISLIAVRCHRTDGSFSRYSAPMITTHPDGSWSYSKA
AQQYDVCFSSDTLKSDVVVFPAACPPVDAELISINGGDTFTRTQTLPNSDKVRIYFNFCD
LFLRL
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcggataaaatatgttaataccaggagtctgcttctcgctctcctttgtctc
agtgcgtggaccgcagctcagatttcctacacggtttcagaggaggcggacaaaggcgct
gcggtgggaaacctcgccaaggatctaaatctcagcgtgcagcagcttcattccacgact
ctacacattacatctggatacaaaaagcagtattttgacatcaatcatgaatcaggggtt
ctgtttgttagcgacaggatagaccgggaggagctttgtcctaatgtggtgaagtgctct
ttaaatatcgaggcaacagtgaaccaccctcggagcctccatcgaatagaagttttaata
aatgatattaatgacaacgcaccgacttttcttgaagatataattacagttgatatgttt
gagtcgtcttatgttggggagaagcacccactccctgtagcgtatgacgcagacgagggt
tctaactccattaggacttacaaattgaacccaaacgagtatttttctctggatgtgcag
aacacaggcgatcagagtgtgtctgcagaattagttctgcagaaagtattagaccgagaa
acagaggctgttattgaactcgttctgactgctgtggatggaggaacgcctcctaaaaca
ggcacgctgcagataaaggtgaatgttttggatgtgaacgataatccgccattgtttagc
aaacctctgtacaaagtgcaagtgatggaaaatgcaaatatcggagcagttttattaact
ctgacagccacggattcagatgaaggcgtgaacggtcagattgagtattatttcacagag
agggcacgtttaaatcatttagaaacgttttccataaataataattctggagaaataaca
gtgaaaggcactattgactatgaggaaaatcaagcctttgagctccgcgtgcaggcacga
gacaaaggcacccctccccgcagtgcgcactgtaaagttctggtcgaagtccttgatgct
aatgacaatgctccagaaatatcagtgtcatcgcttatgagtccagttaaggagaacgcg
gaaataggcacagctgttgccatggtgaccatcaccgacaaagatggaggtaaaaacggt
tttacaatttgtaaaataaaggactctgtaccgtttaaattaaaatctaattataaaaac
tactattcgattttggttgatggacctcttgacagagagcatgtttccagttatgaaata
catgttgaagccaaagatgaagggactcctgctctgtccagctcagctaaaattacaatt
cagatttccgatgtaaatgacaacccccctcaattcacagactctctaatttctgtttat
gtaaaggagaacagccagacgggaactactattcataaactaacaacgactgatttggat
ttgggtgaaaatgcaaagtctatataccgtttaattaatgggtctcccaaaagtccacag
attacagtaaattcagagacaggagatatagtcagtctgcagagttttaaccacgaggag
ttaaaaacatttcagtttcaaatagcctcttctcatagtggatcaacctggtgggtggtg
atcattggggcgctgtacctgctgaaagagccgtctgtcctgtggcatctgacagctatt
aaactgaggagactcagcagaaagatcaccgacaccgacacaatggcgatcaggagatac
aggttgagatcagagaagctgtcctcctttataggcacacacgtgcctataaaggaggac
agcttctctgatctcaatctgcatctactgatcgccattgtgtcggtgtcggtgatcttt
ctgctcagtctcatcagtttaatagctgtcagatgccacaggacagacggttctttcagc
aggtacagcgccccaatgatcaccacccaccctgacgggagctggtcttactctaaagct
gctcagcagtatgacgtgtgtttcagctcagacacactgaagagtgatgtagtggttttc
cccgcagcatgtccacctgtagatgctgaactcatcagtattaatggaggagacactttt
accagaactcagactttacctaactctgataaggtaagaatatattttaacttttgtgac
ctttttttaaggttgtaa
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