Nematolebias whitei (Rio pearlfish): 119408790
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Entry
119408790 CDS
T08042
Symbol
elp1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nwh03016
]
119408790 (elp1)
Transfer RNA biogenesis [BR:
nwh03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
119408790 (elp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_EML_2
TPR_GEMI5
Beta-prop_WDR35_TULP_N
WD40_CDC20-Fz
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
119408790
NCBI-ProteinID:
XP_037531563
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Position
4:complement(6757467..6785633)
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AA seq
1313 aa
AA seq
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MRNLKLLKSLRSSELQGLGSPQCFCVRADSGSLLVASQFSITEFDPRSGQVVCEASLTED
GFLPEDGSGVVVGLQDLAELQSACLATAGGDVVLFNLNSNQMECVGSVDSGLTSMSWSPD
EELVVLTTGQETIIMMTKDFEPITEVGIHQDDFGEGKFITVGWGKKETQFHGSEGKQAAQ
KKLQGVQPAVAWDDRRPRVTWRGDGQLFAIGAICPQTGARKVRVWNREGVLQTTSEPING
LEQALCWKPSGSLIASAQRHPNKHSVVFMEKNGLLHGDFPLPLSKDQAKVKELLWNSDSA
VLAVWLEDLTAGEDGHVNTYIQLWTVGNYHWYLKQSLDFGRDPQKAPVCVCWDTERPLRL
HVVTYNWTCFAYDWGWTTERSPGVDSADNASVAVIDGDKVLVTTFRQCVVPPPMCSFELQ
LKSPVNQVMFLCRPTLTNQIAAFTLDGHVSLFNQDSEERVNKTTDGFEAVCRPLDLQKTY
RFPVPQDEPLALRQLLWLQDELFLAVGSGLLPASSTLMILHPGHDAGDTLAVRSQVEVDG
VVVSVVHSAQTGTVALQMEDGQIMKLLWDGPEASVKAWCDSSGCRINFPVPCIQTSLCSI
GGTESLLGLTDRSRLYAGDTELASNVCSFAVCDDFLLVTTHSHSCRCLQLSALTVTGLQA
ALASDGGQNDETLRRVERGSRIVTVVPQDTRVVLQMPRGNLETVHHRALVLAQLRKWLDQ
LRFRESFECMRKLRINLNLIFDHNPKVFLENVETFITQLDSINSINLFLTELKEEDTTSS
MYPRPDSSPLQTRPVSAQKKVDVVCDALRSAMESMDPNKFCLSILTSHVKKTVPELEIAL
QKVHELRENRPEAPGSVSAEEALKYLLFLVNVNDLYEHSLGTYDFDLVLMVAEKSQKDPK
EYLPFLNMLTSLEPNYQRYTIDKHLKRYKKALVHLAKCGEEHFPEVLHLVKEQKLYSEAL
RLYAADSPQYKFLSCGYAEHLMEQQQAEQAGLLLWRCGELVRALQAFTISSSWRNAICVA
QQIALPPDQLALLARDLAEKLTEQRRYSEAALLLDQYAKDCEEAILALITGAVWEEALRL
IYMHSRQDITETNLKPALLEAVNTQTVFLEAQVATFTRHRNRLAVVREQKEKARLDMLDE
DGPDCPDVELYSEASSAMTASKYSQSNSRISSRSSKNRRKAERKKLSLKEGSPMEDRALM
HALGEILSTVDKMREEVHGLLTALVLFQFDKQAEKLQLAYEGTLQTVEAAVPEVWPEGLQ
NNHAPVTGPNSTANSIMASFQQQRPAAASQPDAEIPAAPKMRNGVKWKLVILK
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatttaaagctactgaagagtttaaggagctctgagctgcagggtctcggctcc
ccgcagtgtttctgtgtccgggctgactctggctcactgctggtcgcctctcagttctcc
atcacagagtttgaccctcgctctggccaggttgtgtgtgaagcctcgctgacagaagac
gggttcctccccgaggatggcagcggggtggtggtcggactgcaggacctggctgagctt
cagtctgcgtgtttggccacagcaggtggcgatgttgttctcttcaacctcaactccaac
cagatggagtgtgttggcagtgttgacagtggtcttacctccatgagctggagtcctgat
gaagagcttgtcgttctcactactggtcaggaaacgatcattatgatgaccaaagacttt
gaacccatcacagaggtgggaattcaccaggatgattttggtgaaggaaagttcatcacg
gtgggttgggggaaaaaggagactcagttccacggctcagagggaaagcaggcggcgcag
aagaagctccagggggtgcagccagctgtggcctgggacgatcgcaggccgcgggtcacg
tggcgaggagacggccagctgttcgccatcggcgccatctgtccccagactggagccagg
aaagtccgggtctggaacagagagggggtcctacagaccaccagcgagcccatcaacggc
ctggagcaggctctttgttggaaaccttcaggcagcctgatcgcgagcgctcagcgtcat
cccaacaaacacagtgtggtgttcatggagaagaacggactgctccatggagacttccct
ctgccgctcagtaaagaccaagctaaggtgaaggagctgctgtggaacagtgactctgca
gttttagctgtttggttggaggacctgacagctggagaggacggacatgtcaacacttac
atccagctgtggacggtgggaaactaccactggtacctgaagcagagtctggactttggc
agagaccctcagaaagctccggtctgtgtctgctgggacacggagcgccccctacggctc
cacgtggtgacctacaactggacctgcttcgcctatgactggggctggacgacggagcga
agccccggagtggacagcgctgacaacgccagcgtggctgtgatcgacggagacaaagtc
ctggtgacaaccttcaggcagtgtgtggttcctcctcccatgtgttcattcgagctccag
ttaaagtcacctgtcaatcaggtgatgtttctgtgtcgaccaactctgaccaatcagatt
gcagctttcactcttgacggacacgtttcactcttcaatcaagattcagaagaacgggtg
aacaaaacaaccgatggatttgaggctgtgtgccgacctcttgaccttcagaaaacctac
agatttcctgttcctcaggacgagcctctggctctgcggcagctgctgtggctgcaggat
gagctgtttttggccgtcggttcgggtctgctgccggcttcctccactctgatgattctt
cacccgggtcatgatgctggggacacactggctgtccggtctcaggtggaagtagacggt
gttgtggtcagtgtggttcacagcgcccagactggaactgtagctctgcagatggaggac
gggcagataatgaagctcctctgggacggtcctgaggcgtcagtgaaggcctggtgtgac
tccagcggctgtcggatcaactttcctgtcccctgcatccagacgtctctctgcagcatc
ggtggaacggaatccttgcttggcctcacagacagatcccgcctgtacgcaggagacaca
gagcttgcttccaatgtgtgttcgtttgcggtttgtgatgacttcctcctcgtcaccaca
cactctcacagctgccgctgcctccagctgagcgcgctcacagtcacagggctgcaggca
gcgttggcctctgatggaggtcagaatgatgagacgcttcggcgagtggagagaggatcc
aggattgtcaccgtggtgcctcaggacaccagagtggttcttcagatgcctcgggggaat
ctggagaccgtacaccacagagcgctggtgttggctcagctcaggaagtggttggaccag
ctgagattcagagagtcctttgaatgcatgaggaagctgaggatcaacctgaacctcatt
tttgatcacaatccaaaggttttcctggaaaacgttgagaccttcatcacacaactcgac
tccatcaactccatcaacctcttcctcactgagctcaaagaggaagacacgaccagcagc
atgtacccccgtcctgacagcagcccgctccagacccggccggtttcagcccagaagaag
gttgacgttgtttgtgatgcgttacggagtgccatggagtcgatggatcccaacaagttc
tgtctgtccatcctgacttctcatgtgaagaagaccgttccagagctggagatcgctctg
cagaaagttcacgagcttcgagagaatcgtcctgaagctcccggctctgtgagcgctgaa
gaggcgttaaagtacctcctcttcctcgttaatgtcaacgatctgtacgagcactcgctt
gggacgtacgacttcgacctcgttctcatggtggctgagaaatctcagaaggaccccaaa
gagtaccttcctttcttaaacatgctgacgagcctggagccgaactaccaacgctacacc
atcgacaaacacctgaaacgctacaagaaggccttggtccacctcgccaagtgtggagag
gagcacttccctgaagttctgcacctcgtcaaggagcagaaactctacagtgaagctctg
aggttgtacgcggcagacagtcctcagtacaagtttctgagctgtggctacgccgaacac
ctgatggagcagcaacaggcagagcaagccggcttgttgctatggcgatgtggagagcta
gtccgagccctacaggctttcaccatcagctccagctggaggaacgccatctgtgtggcg
cagcagatcgcactgccgcccgaccagttggctctgctggccagagacctggcagagaag
ctgacggagcagcgacggtactctgaagctgctctgctgctggaccagtatgccaaggac
tgtgaggaggccatcttggctctgattactggtgccgtctgggaggaggcgctcagattg
atttacatgcacagcagacaagatatcacagaaaccaacctgaaacctgcgctgctagaa
gctgtaaacactcagacggtgtttctggaggctcaggtggcaacgttcactcggcaccgg
aaccgtttggctgtggtccgagagcagaaagaaaaggccagactggacatgctggatgaa
gacggtccggattgtcctgacgtagagctttactccgaggccagcagcgcgatgaccgct
tccaaatactcccagagtaactcccgcatctcctcgaggtcgtcgaagaaccgccggaaa
gcggagaggaagaagctgagcctgaaggaaggaagcccgatggaggacagagccttgatg
cacgcgctcggtgaaatcctcagcaccgtggacaaaatgagagaggaggtccacggcctc
ctgacggccttggttctgttccagtttgacaaacaagccgagaagctccagctggcgtac
gagggaacgctgcagacggtggaggcagctgttcctgaggtgtggcctgaaggtctgcag
aacaaccacgccccggtcaccgggccgaactcgactgcaaacagcatcatggcttcgttc
cagcagcagagacctgcagcagcttcacagccggacgctgagatccctgcagcaccaaag
atgaggaacggtgtcaagtggaaactcgttattctgaagtaa
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