KEGG   Nematolebias whitei (Rio pearlfish): 119408811
Entry
119408811         CDS       T08042                                 
Symbol
rnf4
Name
(RefSeq) RING finger protein 4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nwh04121]
    119408811 (rnf4)
Enzymes [BR:nwh01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119408811 (rnf4)
Ubiquitin system [BR:nwh04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119408811 (rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-RING_4 zf-rbx1 zf_RING_Vps8 Rtf2 Prok-RING_4 RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_6 zf-UDP zf-RING_10 TRAF3_RING Sina_RING zf-RING_11 zf-ANAPC11 DZR zf-RING_16 Zn_ribbon_6 zf-RING_Vps41 HypA Zn_ribbon_8 IBR
Other DBs
NCBI-GeneID: 119408811
NCBI-ProteinID: XP_037531587
LinkDB
Position
4:8467457..8477613
AA seq 195 aa
MSSPAQRKRRPTGRPLVSRTSIKVSRAANAKTMTCRSADAGDPAPPTEPIDVIDGADDGV
EEVVDLTCEGSEATVVDLTTSNDSVLLVDEGPRNRKVQPGESYVLSSDEDEDMTPALHAA
MMSSAHTSRTTPGMISCPVCLDLYSEIVESGRLVVSTKCGHVFCSQCLRDALTSSRTCPT
CRKKLTRQMYHPLYI
NT seq 588 nt   +upstreamnt  +downstreamnt
atgagcagccctgcacagaggaagagaaggcccacaggaagacctctggtctccagaacc
agcatcaaggtcagcagagcagcaaatgccaaaacgatgacttgcaggtcggcggatgct
ggtgaccccgccccccccacagagcccatcgacgtgatcgatggcgcagatgatggtgtg
gaggaggtggtggatctgacctgtgaaggatcagaagctactgtggtcgacctgacgacc
agcaacgactctgtactgctggtggacgaaggtcctcggaacaggaaagtccaaccaggt
gagagctatgtgctcagtagtgacgaagatgaagatatgacccctgcccttcatgctgct
atgatgtcctctgcacacacatccaggacgacgccgggtatgatcagctgtccggtctgt
ttggacctgtactctgagattgtcgagagcggccgattggtcgtttccacgaagtgcggt
cacgtgttttgcagccaatgtctgagagacgctctgacatcatcacgcacctgtcctacc
tgcaggaagaaactcacccgccaaatgtaccacccgctctacatctga

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