Nematolebias whitei (Rio pearlfish): 119408879
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Entry
119408879 CDS
T08042
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119408879 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119408879 (cstf2)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
119408879 (cstf2)
U7-dependent histone pre-mRNA processing factors
119408879 (cstf2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
119408879
NCBI-ProteinID:
XP_037531659
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All DBs
Position
4:14599869..14614486
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AA seq
505 aa
AA seq
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MANVASSVVAAAAAAASRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVY
DRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAP
IFESPYGDGVAPEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLA
YALLQAQVVMRIVDPEIALKMLHRQTTVQPLVPSAQGGAAPPPVNPPTVQPSVPVPQPQP
LPGMHINGAPQMMQPPNMGVVPGPGPGPGPGPAPGPGGLPGNLHHSPTGSAGPAAMERPP
GPGGIPHRGLLGDGPNDPRGGLMLNASGEVIDPNRAYMAAPPPHQAPPVHVPSMISGPPP
EMRGPPMGEPRTMMVDPRGPPMIEPRGPPMEARGRDPRAMDARGPVTGQRVPMVTGMQGP
VPHGMGPNVPPPARPQGPGMSGVPPSGGGFSPGQSQVSTQDQEKAALIMQVLQLTPEQIA
MLPPEQRQSILILKEQIQKTASGAP
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgttgctagttctgtagtggctgcagcagcagctgccgcaagtagagaccca
gctgtcgatagatcattacgatcagtgtttgttggaaacattccgtatgaagccacagag
gagcagctgaaagacatattttctgaagtcggacttgttgtcagcttcaggttagtgtat
gacagggaaacgggaaagccaaagggatatggcttctgtgaataccaagaccaggagacg
gctcttagcgccatgcggaacctgaatggaagagagttcagcggtcgagctctcagagtt
gacaatgcagctagtgagaaaaacaaggaagaacttaaaagtttgggaacaggagccccc
atttttgagtctccttatggagatggtgttgcaccagaagaggctccagagtccatcagc
agagctgtggccagtctgcctcctgagcagatgtttgaactcatgaagcagatgaagctg
tgtgtgcaaaacagtccccaggaggcgaggaacatgctgctgcagaacccccagctggcc
tacgctctgctgcaggctcaggtggtcatgaggattgtcgaccctgagattgccttgaaa
atgctccaccgtcaaactacagtgcagccgttggttcccagtgcacaggggggagcagca
ccaccaccagtcaatcctcccaccgttcagcccagtgtccccgtgccccagccgcagcct
ctgcctggaatgcacatcaatggagcccctcagatgatgcagcctcccaacatgggtgtt
gtccccgggccaggaccagggcctggaccaggacctgcacctggaccgggtggacttcca
ggaaacctgcatcattctcccacaggatcggccggtccagctgccatggagcggcctcca
ggaccaggcgggatcccccacagagggcttctgggagacggccccaacgaccccagagga
ggacttatgctgaacgccagcggagaggtcatcgaccccaaccgggcttacatggcagct
cccccccctcaccaagccccacctgtacacgtaccatccatgataagtggacccccacca
gaaatgaggggacctcctatgggtgaaccacgaaccatgatggtggacccacgaggaccc
cccatgattgagcctcgaggaccaccgatggaagctcgaggccgcgatccgagggcgatg
gatgctcgcggaccagtaaccggtcagagggttcccatggtaacggggatgcaaggtccc
gttccccacggcatgggtccaaacgttcctccccctgcgagaccgcagggtcctggtatg
tctggggtccccccatcaggaggaggtttcagtccaggacagagtcaggtttccacacag
gaccaggagaaggcggccctgatcatgcaggtccttcagctgaccccagaacagatcgcc
atgctgcccccggagcagcggcagagcatcctcatcctcaaagagcagatccagaaaact
gccagcggggctccttaa
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