Nematolebias whitei (Rio pearlfish): 119408930
Help
Entry
119408930 CDS
T08042
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C
KO
K20163
DENN domain-containing protein 4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119408930 (dennd4c)
Membrane trafficking [BR:
nwh04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
119408930 (dennd4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
DUF2464
PPR_2
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
119408930
NCBI-ProteinID:
XP_037531719
LinkDB
All DBs
Position
1:complement(23450430..23489663)
Genome browser
AA seq
1897 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTEKSTPLEQDLSETKSGGFKGPITDLAIINKSAGETVPEGFT
CIDSTYSGQPANLNHGSLKSPEFYLCYKRGRGKPPLIDVGVLYEGKERLIQGCEVIQVTP
YGRCANVNNSSATSQRIFITFRRAQPVQPQNSLAVTDICVIITSKGETPPHTFCKVDKNL
NCGMWGSNVFLCYKKSVSASNSLSYKAGLIFRYPEEDYEAFPLSESVPLFCLPMGAKIEC
WAPNTPNPLPVFSTFVLTISSGEKVYGSAIQFYEPYPVDLLSEKQKIQLGLLTAVEKKMI
PNRSVNSNKCICLLSRWPFFESFRKFLMFIYKLSISSPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSTHDTLILSQPVCTPLPLSGADYGTLLMNLGSENCATLLHFVLMENKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPICPLSLADVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKKHNNWKNLPKKPSKSLINSLSNLHHQLATVHRSPQEDLALDL
TPIDVDFTWHKKKMALEMEIQEAFLRFMASIMKSYRGYLKPITEAPSEKTTAADSLFDLQ
EFLKSRDRAHQKFFSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCVDKLFPPDIITGKG
TKLEKESSEDTKLLELDESQKSEHTVFVMPPEPPPDNGPEPAPCYTYKGFPKLQLDLFDR
PRELRPALSSRTAGASLSSSPALLTKRTKQEIKLAYKMAKRFYARQHLWGRYLFSHSYSL
WFICLPARVRLAKSKHLAMQQAYNMLLRMRAADVEVLDEVCYRVVMQLCGVWGFPVLAVR
VLVEMKRAGVRPNAITYGYYNKAVLECPWPKQYRSGIFMWTKLRNVVRGVAQFRQTQNYT
SSKNGAEIVSTDASPESIDDLSHGSAHSSREVNGEEHNEDAADSYSNTGRQSDQGYGSKD
ELHQELAEPSHTDVDPAEQRNDKPAHDVGDVAGSVDSAVAVAEPISPVEVSSPVPSIVRL
STGTFDGGRETTTGKLFRRHSRKDSMPDEDSSLTAGDAANPTQQQRQKSFSERSCSFSAE
TRAGMLLEKDVDHMASQMGADAHILAGALSGAQSPSSSSSPKALFEDLEEEPEEQRGSSH
KKPSAETDTRVSEESKGDENEVTHDRKQTETQEEEPGVRGATLERADVEVGADPLSLLVS
ESEESASVCSQEPPRSVPVVVARNLAEEIEMYMNLRSPMGAKSSSMELQQSQADSAGSPQ
SLKPLERRSSLPIPPVLTPTGSPSNTPKSNLNTVTRSKTFAVKTKTHGSTTASHGTRSSS
LTALVKSTQAPSLGSVINTISGIKMDTLLSGPKINVLKSSVKQAANVASKMWDVVASAYS
YSDDEDEHPQGGHDFPARLDERIRSEHDVNESPEKKVGPSLVSNGLNQSCTSLGSDGSGS
SDTGRGTQQTHPTPGRSGKCPDSEQSSSSSISQNCALEVLMSSCSQCRSCEALVYDEEIM
AGWTVDDSNLNTTCPFCRTAFLPLLHIEFHDLRLMPDFYMNPSASGDSLHTSSTQPTASS
PAEIKTPGLITFTEEEPKETPENQPTTQKSLIPEPVQSDPLGLLEHQAAGKQQKSGGTSL
TRSNSVGGPLQSLDYSQRPGHGASTTSLPCSLQEVSDVIGKIRVNPKPVSVPYLSPLVLR
KELETLLENEGDQVIYTHKFLSQHPIIFWNLVWYFRRLDLPTHLPGLILNSEHCNNGVQL
PLTSLSQDSKHVYIQLLWDNINLHQEPGEPLYLLWRTFMEKKGTLAPTDHQEIRTLLNTI
VRNITTNDVYGPINLLIRELKRRPDGVKRQRSLYREILFLSLEALGRENIDVEAFEREYH
LAYQGLSPEQLKSLHRIDHPPTLCDMWCLKNFGPLII
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggacaagggtcaccgcgttaccgactactttgtggtggccggcctgacagaa
aagtccacgccgctggaacaggacctgtctgagaccaagtctggtggattcaaaggaccc
atcacagacctggctatcattaacaaatcagcaggtgaaaccgtccctgaggggttcacc
tgcatcgacagcacctacagcggccagccagccaacctcaaccatggcagtctgaagagc
cccgagttctacctgtgctacaaacgagggcgaggaaaacctccgctcatcgatgtcgga
gtgctgtatgaggggaaggagcgtctgattcagggctgcgaggtcatccaggtcactccg
tacggccgctgcgctaacgtcaacaacagctccgccacctcgcagcgcatcttcatcacg
ttccggcgagcgcagcccgtccagcctcagaattccctggcggtgacggacatctgcgtc
atcatcaccagcaagggagagacgccgccgcataccttctgtaaggtggacaagaacctc
aactgtggcatgtggggctccaacgtgttcctgtgttacaagaagtcggtatcggcgtca
aactctctaagttacaaagcaggtctaatctttcgctaccctgaagaggactatgaggct
tttcctctgtcagagtctgtcccccttttctgtttgcccatgggcgcaaagatcgagtgt
tgggcgccaaacactcccaaccctctacccgtcttttccacgttcgtcttaactatcagc
tctggtgaaaaggtgtatgggtcagccatccagttctacgagccgtacccagtcgatctt
ctgagtgagaagcagaagatccagctgggtctgctcaccgcggtggagaagaaaatgatc
cccaaccggtctgtaaactccaacaaatgcatctgtctgctctcccgctggcccttcttc
gagtcctttcgcaagttcctgatgttcatctacaagctctcaatctcgagcccgcacccg
ctgcctattgaaaagcacatctcgcacttcatgcacaacgtgtcgtttccttcccctcag
agacccagaatccttgtccagctctcgacacatgacactttgatcctctcccagcccgtg
tgtactccattaccactcagtggggctgactatggcactctgctgatgaatctgggctca
gagaactgtgccacactgctgcactttgttctgatggagaacaagatcctgctgcactcg
ctcagacccgccgtgctcaccggagtggcagaggccgtggtagctatgatcttccccttc
cagtggcaatgtccatatatccccatttgcccactgtccttagcagacgtcctcaacgcc
ccgtgtcccttcatcgtgggtgtcgactcccgttacttcgacctgtatgaccccccgcca
gacgttgtctgtgtggatctggacaccaacactatctacttgtctgatgagaagaaacac
aacaactggaagaatctcccaaagaaacccagcaagagtctgattaactcgttgagcaac
ctgcaccaccagctggccacagtgcatcggtctccacaagaggacttggcattggacttg
acccccatcgatgtcgacttcacgtggcacaagaagaagatggctctggagatggagatc
caggaagccttcctccgtttcatggcgtccatcatgaagagctaccgaggctacctcaaa
cccatcaccgaggcaccgtccgagaagaccacggctgcagactcccttttcgacctgcaa
gaatttctgaaaagtagagaccgggctcatcagaagttcttctcccaactcaccaagacc
cagatattcatccgcttcatcgaggagtgcaccttcgtcagcgacaaggacacaggcttg
gcgtttttcgacgactgtgtggacaagcttttcccccctgatataatcactggcaagggt
accaagcttgaaaaggaatcgtctgaagacaccaaactgctggagctggacgagtctcag
aagagcgagcacacggtctttgtcatgcctcccgagccaccgcctgataacgggccagaa
cctgctccttgctacacctataaaggtttcccaaagctgcagctggatctgtttgaccgt
cccagagagttacgccccgcactgagcagcagaacagcgggggccagtctgtccagcagt
cctgctctgctgactaagagaactaagcaggagatcaagctggcgtacaagatggcgaag
cgtttctacgccaggcagcatctgtggggccgctacctgttcagccacagttacagcctg
tggttcatctgcctgcctgcgagggtgcgactggctaagtccaagcatctggccatgcag
caggcctacaacatgctgctgaggatgagggccgctgatgtggaggttctggacgaggtg
tgctacagggtggtgatgcagctgtgcggtgtgtggggttttcctgtgttggctgtgcga
gtcctggttgagatgaaacgagctggagtacgacccaacgccatcacatacggatactac
aacaaggctgtgttggagtgcccgtggccaaaacaataccggagcggcatcttcatgtgg
accaagctgcgtaacgtcgttcggggcgtggcccagttcagacagactcaaaactacacg
tcgtccaagaatggagccgagatagtgtccacagatgcatcgccagagagtattgacgat
ctgagtcatggaagtgctcacagctcaagggaagtcaacggcgaggaacataacgaggac
gcagcagacagctacagtaatactggaaggcagtcggatcagggatacgggtccaaggat
gagttgcatcaggagctggcagagccttcacatacagatgttgatccagctgagcagaga
aatgataaaccggctcatgacgtaggagacgttgctggctccgtggacagtgcagtagca
gtggcagagcccatcagtcctgttgaagtgtcctcgcctgtccccagtatcgtcagactg
tccactggcacctttgacggcggtagagaaacaacaacaggaaaattgttcagaagacac
agtaggaaagacagcatgcctgatgaagattcctcgcttacagctggcgatgcagctaac
ccgactcagcagcagcgtcagaagagcttctccgaacgcagctgcagcttcagcgccgag
actcgagctggaatgctcctggagaaagacgtggatcacatggccagtcaaatgggcgca
gatgctcatattctggccggggcgctctctggggctcagagtccatcgtccagcagctcg
cccaaagctctttttgaagacctggaggaagagcccgaagaacaaaggggctcatctcat
aaaaagccttcagcagagactgacacgagagtgtcggaggaaagcaagggagatgaaaac
gaggtgacgcacgacaggaagcaaactgaaacacaggaggaggaacctggggtgcgagga
gctaccttggagagggccgatgtagaggttggggccgacccgctctccctcctggtgtca
gagagtgaagaatctgcttctgtttgcagccaggagccgccacggtctgtgccggttgta
gtggcccgtaacctggctgaggagatcgaaatgtacatgaatctgagaagccccatggga
gccaagtcctccagcatggaactgcaacagtcccaggcagactctgctggcagccctcag
tccctaaaacctttggagcggaggtccagcctgccaatccctcctgttctaactccaacc
ggctcaccaagcaacacgcccaaaagcaacctcaacaccgtcactcgctcaaaaaccttt
gcagtaaagacaaagacccatgggagcaccacggcgagccacggtactcggtcctcttcg
ctgactgcgttggtcaagtccactcaggcaccgtcgctgggctccgtcatcaacacaatt
tcaggcataaaaatggacactttgttgtcaggacccaaaattaatgtgctgaagtcgagc
gtgaagcaggcggcgaacgtggccagcaaaatgtgggacgtcgtggcatcagcttactcg
tactctgatgatgaggacgaacatcctcaaggtggccatgatttccccgcccgactggac
gaacgcatacggtccgagcacgacgtgaacgagagtcctgagaaaaaagtcggccccagt
ttagtttcgaacggtctaaaccagagctgcaccagcctgggcagcgatggcagtggcagc
agcgacaccggccgaggaacgcaacagacacacccgactccaggacgttctggcaagtgt
cccgactccgagcagagctcctcctccagcatctcccagaactgtgcacttgaggtgctg
atgtccagttgctcccagtgccgctcctgtgaagctctggtttacgatgaggagatcatg
gcgggctggacggtggacgactcgaatctcaataccacttgtccattctgtagaacggcc
ttcctgcctttactgcacatcgagtttcacgacctgcgcttaatgcccgatttttacatg
aatcccagtgcctcaggagatagtttacacacaagcagtactcagcccacagccagcagt
ccagccgaaatcaaaacaccaggtttaatcacgttcactgaggaggagcctaaggagact
ccagagaatcaacccacaacacaaaagagtctgattccagagccggtccagtctgaccca
ctgggtctgctggagcaccaggcagcggggaagcagcagaaatcaggcgggacttcgctc
acacgcagcaacagtgttggaggtccgctgcagagcctggactactcccagagacctgga
cacggggcctccaccaccagcctgccctgcagtctgcaggaggtgtcggatgtcattggg
aagatacgtgtgaatcccaagcccgtgtctgtaccgtacctgagccccctggttctacgg
aaggagctggagaccctgttggagaacgagggcgatcaggttatctacacgcacaagttc
ctgagccagcatcccatcatcttctggaacctggtgtggtatttccgtcgcctggacctc
cccactcacctgccgggtctcattcttaactccgaacactgcaacaacggagtgcagctt
cccctgacgtctctgtcccaggacagtaaacacgtgtacatacagctcctgtgggacaac
atcaacctgcaccaggaacccggagaacctctttatctgctctggagaaccttcatggaa
aagaaggggaccctggctccaacggaccaccaggagatccgaaccctcctcaacaccatc
gttcgcaacatcaccaccaacgacgtatacggtcctatcaacctactgatccgagagctc
aaacggcgtccagacggcgttaaacgacagaggagcctttatagagagatcctgtttctg
tcattggaggccttgggacgggagaacatcgatgtagaggccttcgaaagggagtaccac
ctggcctaccaagggctgagcccagagcagctcaagtctttgcaccgcatcgatcaccca
cccactctctgtgacatgtggtgtcttaaaaatttcggacccctcattatctaa
DBGET
integrated database retrieval system
