Nematolebias whitei (Rio pearlfish): 119408940
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Entry
119408940 CDS
T08042
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03013
Nucleocytoplasmic transport
nwh03015
mRNA surveillance pathway
nwh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119408940 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
119408940 (acin1b)
03015 mRNA surveillance pathway
119408940 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119408940 (acin1b)
03041 Spliceosome [BR:
nwh03041
]
119408940 (acin1b)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119408940 (acin1b)
Spliceosome [BR:
nwh03041
]
Complex C
Other components
EJC/TREX
119408940 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_ACIN1
RSB_motif
SAP
RXYLT1_N
Motif
Other DBs
NCBI-GeneID:
119408940
NCBI-ProteinID:
XP_037531731
LinkDB
All DBs
Position
1:23260489..23301774
Genome browser
AA seq
1168 aa
AA seq
DB search
MADEDITLDGKPLQSLRVADLKAALEQRNLPKSGQKNTLIKRLKGALMLENLQRSSSTQS
VLQPNSQIGEEMCQNSFIKQYLAKQQELLRQRLEREAQKEDDDDDESPAGPEEEDDEDND
SSSDKHQPSLAQSAVPDLRGGDSSFHHQEALETPRVRVQQATFQQGEPPAPSPPRAVASL
SVRVVGQPDCQGFPLASPRPQEKEPAGLSQPGSAHPVLNLGRSAKSSAGNHVRDDSDEDD
NDSDNEDEDWGPDPGRSGRQKRMPPSLPQLAPNMSSAASRSKRKLQPPQHILPPQVDPIP
MQLRHPTPPPSPPPNLFPLPDTPKQSPPDDQERHGLREAQAASFHPPSMQRQDSDSSSRS
SSPEPHVVRRPGPLSLLVHKMETEEASSARGLSEEKAHSTSGRSGESLPQHGSEKERKMK
EEKEREQQQGLEKERRKTQEQEREKKRSGEKKEEKTRLEEERKRRQREEQEKERKRREQE
NDRKRKEEEKKREERRVKEEKEKKRKKASEDRMVAETQGSGSSSDSDSKSDSSSHSSSSS
SSSSRDKTQTANQLKKADQKQDGEDEKKANLGKALEKQNLSKREVSEPSTAEVEPDSESS
VAQQPASGSEPESSESRMEESTTPKAFAARKISLSSSKASPARTDGAAAEPDTGNAGGRK
RRWGSSTAVTVKKPSISITTDSLKSLIPDIKVNQEEVVDIHPEELYLSGDEENLDTSRGD
PDKGLKIRRTVTQVVPSDSQENGQTNEEEEDVEKAEKETPHRTPPKDNRRSSLSDEPPEP
QISVNLDGETKKVTPSDSLVRRSISQQKSGVSVTIDDPIRSTRQPSPPRGKVSNIIHVTN
LVRPFTLLHLKELLNRTGSVMEEGFWIDKIKSHCYVTYATTEETVATRTALHGVRWPASN
PKVLSVDFCEQDELDFHKGILKPKKEEEHVAQLVVPQNRLPPLMPERDRDRDKERERDRE
RERDRGVRDLWAERQREMERREKARGEREWDRDKVCDFSRPGEDGRRSRSRERERRRRER
AKSRERKSDKKEKDEPPAKLLDDLFLKTKAAPCIYWLPLTEEQATQRILERLERQKEREQ
RRKEQDEANKKREEEKKVERLKGREKDSTTTSGVAASRGANGDRERERVRDREGDKRKDG
SHRSKRPSPGFGSGRRSRSRSNPRERRR
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatggaaaacctctacaatcgctccgagttgcggat
ttgaaagctgcccttgagcaaaggaacctcccgaaaagcggccagaaaaacacactcatt
aagcgactgaaaggggctctaatgctggaaaacctacagaggtcatcctctactcaaagt
gttctgcagccaaactctcagatcggtgaagagatgtgtcagaacagcttcataaagcag
tacctggccaagcagcaggagctgcttcgtcagagactcgaaagagaggcccagaaagaa
gatgacgatgatgatgaaagcccagccggaccggaggaggaggatgatgaagataacgac
agctcatcagataaacatcagccttcactggctcagtctgcagtacctgaccttagagga
ggagattcttctttccaccaccaggaggctcttgaaactccacgtgtcagagtacagcag
gctacctttcagcagggggagcccccagccccctcccctccccgtgctgttgcctccctg
tcagtgcgtgtggtgggacagcccgactgccagggatttccactcgcttctcctcgtccc
caggagaaggagcctgcaggactcagtcaacctggatcggctcaccctgtcctgaacctc
ggtcgttctgccaagagttcggcaggaaatcacgtccgggatgacagcgacgaagacgac
aatgatagtgacaatgaagacgaggactggggaccagacccgggcagatcaggacgccaa
aagagaatgcctccctcgctgccacagctggcccccaacatgtcatcagctgcttcgagg
tctaaacgcaagcttcagcctccgcagcacatcctgcctccacaggtagatcccatcccc
atgcagctgcgccaccccacacctccaccctctccaccccctaacttgttccccttacct
gacacgcccaagcaaagcccgccagacgatcaggaacgccacggcctccgagaggcgcag
gcggcatctttccaccccccctcgatgcagagacaagattcagattcaagctcacggtca
agcagccctgaaccacatgtggtgcgccgacccggacccctgtctctgctcgtacacaag
atggagacagaggaggcttcttcagcccgtggcttgtcagaagagaaggcgcactcaaca
tctgggcgctccggtgaatctctgccacagcacggatcagaaaaggagagaaagatgaaa
gaggagaaggagagagaacaacagcaggggctggagaaggaaagaaggaaaacccaagaa
caggaacgagagaagaagcgctcaggggagaagaaggaagagaaaactcgactggaagag
gagaggaagcggcgtcagagagaggaacaggaaaaagagagaaaacgtcgagagcaggaa
aatgaccggaaacgtaaggaagaggaaaagaaaagagaggagcgacgggtgaaggaggaa
aaggaaaagaaacggaagaaagccagtgaagacaggatggtggcagagactcaaggttca
ggttcctcttcagattctgattccaagtcagactcttcatcacattcgtcatcttcctcc
tcgtcctcttccagagataaaacccaaactgcaaaccagctgaagaaggcagaccaaaag
caagacggagaagacgagaagaaggctaacttgggtaaagcgttggagaaacaaaacctt
tcaaaaagggaggtttcggagcccagcactgcagaggtggaaccagactctgagagctct
gtggcccagcagccagcttctgggtcagagccagagagcagcgagagccggatggaggag
agcaccactcctaaggcttttgccgctcgcaagatttccttaagcagcagcaaggcttct
ccagccagaacagatggagcggcagcagagcccgacactggaaatgcaggagggaggaag
aggcgatggggctccagcacagcagttactgttaagaaaccatcgatcagcatcaccaca
gactcactgaagtctttgattcctgacattaaagtgaaccaggaggaggttgtggacatt
caccctgaggagctgtatttgtctggagacgaggagaacctggacaccagtcggggcgac
ccagacaaaggcctcaagatccgacgcaccgtcacgcaggttgttccaagtgacagccag
gaaaacgggcaaacaaacgaagaagaagaagacgtggagaaagctgagaaagaaacgcca
cacaggactccaccaaaagacaatcggaggagcagtctttcagatgaacccccagaaccg
cagatatctgtgaacctggatggagagacaaagaaagttactcccagcgacagtctggtt
cgccgctccatcagtcagcagaagtccggtgtctctgtcacaatcgacgaccctattcgc
tcaaccaggcagccctcaccgccacgtggaaaagtctccaacatcatccacgtgacgaac
ctggtacgaccctttaccctgctacatctcaaggagctgctgaaccggacaggaagtgtg
atggaggagggtttctggattgacaagatcaagtctcactgctacgtcacatacgctacc
acagaggaaaccgtcgccaccaggacggctctgcacggagtcagatggcctgctagtaat
cccaaggtgcttagcgtggacttttgtgagcaagatgagctggactttcacaaaggcatc
ttgaagccaaagaaagaggaggagcatgttgcccagctggtcgttcctcagaaccggctg
ccccctctgatgcccgagcgggaccgggaccgagacaaggagcgtgagcgggacagggaa
cgggaacgggaccgaggagtccgggatctgtgggcagagcgtcagagggagatggagcgc
cgtgaaaaggcgcgaggcgagcgagaatgggaccgggataaagtctgcgatttttcaaga
ccgggagaggacgggcggcgatctcgatccagagagcgagagaggaggaggagggagaga
gcaaagagcagggagaggaagagtgacaagaaggagaaagatgagcctcctgctaaatta
ctagacgacctgttcctgaagaccaaagcagctccttgtatatactggcttcccctcact
gaagagcaggcaactcagaggatcttagaacgcttggagcggcagaaggagcgcgagcaa
cggcgcaaggagcaagatgaggcgaacaaaaagcgtgaagaagagaagaaggttgaaagg
ctgaaaggtcgggagaaagacagcacgacaacaagcggcgtggccgccagcagaggagcc
aacggagaccgggagcgagagcgggtccgagacagagagggggacaagaggaaagacggc
agccaccgatccaagcggccctcaccaggctttggcagcgggcggcgttctcgtagtcgt
agcaaccccagagaacggcgtcgctga
DBGET
integrated database retrieval system
