Nematolebias whitei (Rio pearlfish): 119408962
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Entry
119408962 CDS
T08042
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119408962
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119408962
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119408962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
119408962
NCBI-ProteinID:
XP_037531750
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All DBs
Position
4:complement(19049554..19064810)
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AA seq
631 aa
AA seq
DB search
MDPPRTRSRSRSGFYHFALNGGGAGGGSAVGNGSLMSSSGGGGGGLNYPPQSNTGWAPHH
GGRSYSEIQQPPQQHGQGSYLPAGVQRHSAHAAHRHPGAGGAFHFHPDNVCSEDRDKLED
SPSPKRQRLSQQSMLDLSSAPLSTPSSPIRPWELPPNRRPHPHYMPERCHTPVRNRRSPP
VRRQRGRRDRLARHHHHHHYNSSNNHHCHQPPAGHHHHPQLPHSHHGLSPGHQDENYRHP
PQYPPYSQPPQRGLGSGPEERLAYRPPNPSPRPLHQSPNLSPRLLHVGPHPQHPHPNPSQ
QQSSGLLDIQEQGLAPVSYPVSPLGALPGLPPRSAPQQIPACSVVFNGQHYPVCSVPPPV
IQTCSVQHLPMPYPFTSLLSSDPSFLIPPPHLAHPSTHLPHHPPHLPQTAQFGPYPAQQA
RSPLQRIENDVELLGEHLSLGAGLHYSPAAHPALTPHSTQLHFLSHDPLPQEFFGVSYPN
FIPRRLPGRRYRSQQLPPSPYHPSLLPYFLSMLPVQPTGPAISLELDVDDGEVENYEALL
NLAERLGEAKLRGLTKGDIEQLPSYRFNPNNHQSEQTLCVVCMSDFESRQLLRVLPCSHE
FHGKCVDKWLRANRTCPICRADASEVQRDSE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggacccaccaagaacccggtcgcggtctcggtctggcttctaccactttgccctgaac
ggaggaggcgcaggaggaggcagcgctgtcgggaacgggagcctgatgagctccagcgga
ggaggaggaggaggtctgaattaccctccgcagagcaacaccggctgggcgccacaccac
ggaggacggagctactctgagatccagcagcctccgcagcagcacggccaggggagctac
ctgcccgcgggggtgcagcgccactcggcacacgcggctcacaggcaccccggggctgga
ggtgcgtttcattttcacccagataatgtgtgcagcgaggatcgagacaaactggaggac
agccccagcccgaagcggcagcgcctttcccaacagtccatgttggatctaagctccgcc
cctctgtccactccatcctctcccatccgaccatgggagctgccccctaaccgcagacca
cacccccactacatgcccgagagatgccacacacctgttagaaaccgccgcagccctcca
gtgagacgtcagcgtggccgaagagaccgccttgctcgccaccaccatcaccaccactac
aatagcagcaacaatcaccactgccaccaaccccccgcaggtcaccaccatcacccccaa
ctccctcactcccaccacggcctatcccctggccatcaggatgaaaactaccgccaccct
cctcaataccccccctacagccagccacctcaacgagggctggggtccggccctgaagag
cgcctggcttaccgtcccccaaacccctccccgaggcctcttcaccagtcgccgaacctg
tctcccaggcttctgcacgttgggcctcatccacagcacccgcaccccaacccatcccag
caacagagcagcggcctcctggacatccaggagcagggtttagctccagtatcgtatcct
gtgtctccactgggcgccctgcccggcctgccccctcgctcggccccgcagcagatccca
gcatgctcggttgttttcaacgggcagcattatcccgtctgcagtgttcctcctcctgtt
attcagacttgttctgtccagcatttgcccatgccctacccatttacatcactactttcc
agtgatccgtccttcttgattcctcctccccaccttgctcatccttccacacaccttccc
caccatccaccccacctgcctcagacagcacaatttggaccttatccagctcagcaggcg
cgatcgcctttacagaggatagagaatgacgtcgagctgcttggagagcacttgtctctg
ggcgccgggctccattattctcctgctgcacacccagccctcacccctcactccacacag
cttcacttcctctcccatgatcctctgccacaggagttctttggagtgtcctatccaaac
ttcatccctcggcgtctcccagggcggcgttaccgttcacaacagcttccaccttcgcct
taccaccccagcctcttgccttactttctctcaatgctgccagtccagcccacaggtcct
gccatcagcctggagctggatgtagatgatggggaggtggagaactatgaggccctcctg
aatcttgccgagcgcctgggagaggccaaactccgaggactgaccaagggagacatcgag
cagcttccctcttaccgatttaatccaaacaatcaccagtcggaacaaacactgtgtgtg
gtgtgcatgagtgattttgagtcccgacaactgctgcgagtgctgccctgcagccacgag
ttccacgggaagtgtgtcgacaagtggctgagggccaacaggacgtgtcccatttgtcga
gccgatgcctcggaggtccagagagactcggagtga
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