KEGG   Nematolebias whitei (Rio pearlfish): 119408986
Entry
119408986         CDS       T08042                                 
Name
(RefSeq) F-box/WD repeat-containing protein 11
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Pathway
nwh04114  Oocyte meiosis
nwh04120  Ubiquitin mediated proteolysis
nwh04218  Cellular senescence
nwh04310  Wnt signaling pathway
nwh04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    119408986
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    119408986
   04340 Hedgehog signaling pathway
    119408986
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    119408986
   04218 Cellular senescence
    119408986
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nwh04121]
    119408986
   03036 Chromosome and associated proteins [BR:nwh03036]
    119408986
Ubiquitin system [BR:nwh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     119408986
Chromosome and associated proteins [BR:nwh03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     119408986
SSDB
Motif
Pfam: WD40 Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_TEP1_C WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WD40_MABP1-WDR62_2nd Beta-TrCP_D Beta-prop_SCAP WDR55 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 F-box-like Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_IP5PC_F WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_DCAF4 WD40_like Beta-prop_HPS5 Beta-prop_IFT140_1st F-box Beta-prop_WDR11_2nd Beta-prop_Nup120_160 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_VPS8 WD40_2 DUF6188
Other DBs
NCBI-GeneID: 119408986
NCBI-ProteinID: XP_037531777
LinkDB
Position
4:complement(21022090..21042859)
AA seq 554 aa
MTSLNLRAADAGLGFHFHSEFRGGIINMEPEMEDKTVELMNTSGMESQNLVDDLSPKKNT
VLKLSNGPVVGSRKRPSEGNYEKEKEHCIALFDQWSEADQVEFVERLISRMCHYQHGHIN
SYLKPMLQRDFITALPAQGLDHIAENILSFLDARSLCAAELVCKEWQRVISEGMLWKKLI
ERMVRTDPLWKGLSERHQWEKYLFKNRTSEIPPNSYYHSLYPKIIQDIETIEANWRCGRH
NLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKQTLECLKVLTGHTGSVLCLQY
DERVIVTGSSDSTVRVWEVTTGEVLNTLIHHNEAVLHLRFANGLMVTCSKDRSIAVWDMA
SPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIAC
LQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW
DLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVSTNGQS
EGRSPSRTYTYISR
NT seq 1665 nt   +upstreamnt  +downstreamnt
atgacgtctctgaatttgcgggccgccgacgcagggctgggtttccattttcacagcgag
tttcggggggggatcatcaacatggagccagagatggaagacaaaacagtagaactaatg
aacacatcagggatggagtctcagaatttagtggacgatctgtcgccaaagaagaataca
gttctgaagcttagtaacggcccggtcgtggggtctcgcaagcgtccatcagaagggaat
tatgagaaggagaaggaacattgcatcgccctgtttgaccagtggtcagaggccgaccag
gtggagtttgtcgaacgcctgatttcccgtatgtgccactaccagcacggccacatcaac
tcctacctcaaacccatgctgcagagggattttatcactgcattgccagcccagggcctg
gatcacattgcagagaacatcctgtcttttctggatgcacgttcgctgtgtgcggcagag
ttggtgtgtaaagagtggcagagggtaatttctgagggaatgctgtggaaaaagctcatt
gagcgtatggtccgaactgaccctctttggaaaggcctgtctgaaagacaccagtgggag
aaatatctgttcaaaaaccgcacatcagaaatcccacccaattcctactatcactctctt
tatcctaagatcattcaagacatagagacaattgaggctaattggcgatgtggcagacac
aacttgcaaaggattcagtgtcgctcagaaaacagtaaaggtgtttactgtctccaatac
gatgatgacaagatcatcagtggccttagggacaactcaatcaagatctgggataagcag
acactggaatgtctgaaggtactgacaggtcacacaggctcagtattgtgtctccagtac
gacgagagggtcattgtcactgggtcttctgactccactgtcagggtgtgggaggtgacg
acgggtgaggtactgaacacactgattcatcacaatgaggcagttcttcacctgcggttt
gcgaatggtctgatggtcacctgctctaaggaccgttcaattgcagtctgggacatggcc
tcgccaactgacatcagcttgcgtcgtgtccttgtgggacaccgcgctgccgtcaacgtg
gttgactttgatgacaaatatattgtgtccgcctcaggggaccgcaccatcaaggtatgg
agcaccagcacctgtgagtttgtacgcactctaaatggtcataagagagggatcgcctgt
ttacaatatagagatcgtctggtagtcagtggttcatctgacaacacaatacggttatgg
gacatagagtgtggcgcctgtttgcgggtgctggaaggtcacgaggagttggtgcgctgc
attcgctttgacaacaaaaggatcgtcagcggcgcctacgatggcaagataaaagtgtgg
gacctgcaggcagcgctcgacccacgggcccctgccagcacattatgtctgcgcactcta
gtggagcactctggccgcgtattccgcctgcagtttgacgagtttcagatcatcagcagt
tctcacgacgacaccattctgatctgggacttcctgaacgtctcaacgaatggccagtca
gagggacggtctccttctcgcacctacacttacatttctagatag

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