Nematolebias whitei (Rio pearlfish): 119408987
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Entry
119408987 CDS
T08042
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119408987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119408987
03012 Translation factors [BR:
nwh03012
]
119408987
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119408987
Translation factors [BR:
nwh03012
]
Eukaryotic type
Release factors
119408987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
119408987
NCBI-ProteinID:
XP_037531778
LinkDB
All DBs
Position
4:complement(21044722..21051387)
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AA seq
443 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYVLRVHGAESNGAENDEKILYLTPEQEKDK
SHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILR
YRVDFQGMEYQGEDDEFFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccagcgcggcggacaggaacgtggagatatggaaaatcaagaagctg
atcaaaagtttagaagctgcccgtggcaatggcaccagtatgatctcgttgatcattccc
ccaaaggaccagatctccagagtagccaagatgttggctgatgaatttggcactgcttca
aacatcaagagtcgagttaacaggctctctgtacttggggccatcacttcggtacaacaa
agactaaaactctacaacaaggtgccacccaatggcttagttgtgtattgtggaacaatt
gtaaccgaggaaggcaaggagaagaaagtcaatattgactttgaaccttttaaaccaatc
aacacatctttgtacctctgtgacaacaagttccacactgaggcattgacagccctgctc
tctgatgacagtaaatttggctttattgtcattgatggtagtggagcactgtttgggaca
cttcaaggcaacaccagggaggtgctgcataagttcactgtggacctacccaagaagcac
ggcagaggaggacagtctgctctgcgttttgcacgtctaagaatggaaaagagacataac
tacgtgagaaaagttgcagagactgctgtccagctctttgtatccaacgacaaagtaaat
gtggcaggaatggttttggctggctctgctgattttaagacggaacttagccaatctgac
atgtttgatccaaggttacaggctaaggttttaaagctagttgacatctcttatggaggc
gaaaatggtttcaaccaggccatcgagctttctgcagaagttctttcgaatgtcaagttt
attcaggagaagaagctcatagggcggtactttgatgagattagccaggacacgggcaag
tactgctttggagtggaggacacactaaaagccctagagatgggagcagtggagatcctc
atagtctatgagaacttagacaccatgcgttatgttctacgtgtgcatggggccgagagc
aatggagctgagaacgatgagaaaattttgtacttgacgccagaacaggagaaagacaag
tctcacttcacagacaaagagacggggcaggaacacgagctgattgagagcatgccactg
ctcgagtggtttgcgaacaactacaaaaaattcggagccactctggaaattgtaacagac
aagagccaggaaggatctcagtttgtcaagggcttcggaggaattggaggtatcttgcgg
tacagggtggatttccagggcatggagtaccaaggagaggatgatgagttctttgatttg
gatgactactag
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