Nematolebias whitei (Rio pearlfish): 119409103
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Entry
119409103 CDS
T08042
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04080
Neuroactive ligand-receptor interaction
nwh04082
Neuroactive ligand signaling
nwh04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119409103
04082 Neuroactive ligand signaling
119409103
04519 Cadherin signaling
119409103
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119409103
Ion channels [BR:
nwh04040
]
Ligand-gated channels
GABA-A
119409103
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
119409103
NCBI-ProteinID:
XP_037531896
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All DBs
Position
4:complement(30293466..30301006)
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AA seq
450 aa
AA seq
DB search
MTIQLQELLIFCLIVTQSGCIFPSNHWGEWNNSQLLPTIQRLMKGYNRYLRPNFNEGPVE
IGMSLDIASIDAISEINMDYTATIFLRQRWRDSRLVFPGNESVSVDGRLVSLLWIPDTFI
PDSKRSFLHDVTVENRLIRIFSNGTVLYALRITATIACNMDLTKYPMDKQVCTLQLESWG
YNIQDVVFYWTRGNDSVRGLDTLRLAQYSVESYNTSVSEAVYETGHYPKLVLHFSLRRNV
LFFILETYVPSILLVVLSWVSFWISQSSVPARTCIGVTTVLTMTTLMMGARTSLPNANCF
IKAIDVYLGICFTFIFGALLEYACAHFYTMQNQTIEDLHRELLRELCESNGNGSIPINIA
SQPNQSVEVGSTAEEPAEEPVNSDIKKHATAKEKVQSQGCGLSSVKDASRRAASVFIVEN
PHNIDRHARTVFPTAFLFVNILYWLYYLFL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccagctgcaggagcttctcatcttctgcctgatcgtcacacaaagtggctgc
atattccctagcaaccactggggtgaatggaacaactcccaacttctgcccacaattcag
aggctcatgaaaggatacaaccgctacctcaggcctaatttcaatgagggtcctgtggaa
atcggaatgagtcttgatattgccagcattgacgccatctctgaaattaatatggactac
accgccactatcttcctccgccagcgctggcgtgattccaggttggtgtttcctggaaat
gagagtgtgagcgtggacggacgcctggtgtccctgctgtggatccccgacaccttcatc
ccagactccaagcgctccttccttcacgacgtcacggtggaaaaccgcctcatccgcatc
ttcagcaatgggacggttctctacgcccttcgcatcacagctacaattgcgtgcaacatg
gacctgaccaaataccccatggacaaacaggtgtgcaccctgcagctggagagctggggc
tacaacatccaagatgtggtgttctactggaccaggggcaatgactcagtgaggggcttg
gacacgctgcggctggctcagtacagtgtggagagctacaacacatcagtgtcagaggct
gtgtatgaaacaggacattaccccaagctggtgctgcatttttccctgcgcaggaacgtc
ttgttctttatcttggagacttatgttccttccattctgctggtggttctctcctgggtc
tctttttggatcagccagtcctctgttcctgctcgaacctgcattggggtgaccacagtc
ttgacgatgaccacgctgatgatgggcgctcgtacctctctgcccaatgcaaactgcttc
ataaaggccatagatgtttacttgggcatctgtttcaccttcatctttggtgccctgctg
gaatacgcctgcgctcatttttacaccatgcagaaccaaaccatcgaagatttacacagg
gagctactgagggagttatgcgagtctaacggaaacggctcgatcccaattaacattgcc
agccaaccaaaccagtcggtggaagtcggttccactgcagaggagcctgcagaggagccc
gtgaacagtgacattaagaagcacgccacagcgaaagagaaagtgcagagtcagggctgc
ggtttatcgtccgtgaaagatgcgtcccgcagagcagcatctgtcttcattgtggaaaat
ccacacaacatcgatcgccatgcccgcactgttttccccacagcttttctcttcgtcaat
attctgtactggctttattatctcttcctctga
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