Nematolebias whitei (Rio pearlfish): 119409245
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Entry
119409245 CDS
T08042
Name
(RefSeq) lamin-A
KO
K12641
lamin A/C
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04210
Apoptosis
nwh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
119409245
09142 Cell motility
04820 Cytoskeleton in muscle cells
119409245
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119409245
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
119409245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
LTD
CENP-F_leu_zip
TPR_MLP1_2
DUF1326
Laminin_II
Crescentin
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
119409245
NCBI-ProteinID:
XP_037532023
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All DBs
Position
5:5553978..5581536
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AA seq
635 aa
AA seq
DB search
METPSQKIGRRAVSPARITRLQEKEELCNLNDRLAVYIDKVRSLESENASLRLRISESES
VVTRDLSGIKATYETELSDARKTLDQVAKERARLQLELGKIREEHKELKARNAKKVSDLE
AALVRLRDLEAMLNSKDAAFTTTLGEKRGLEAEVKELKAQLAKLDISLADVKKQLQDEML
RRVDAENRLQTLKEELEFQKNISAEELRESKRRHESRMVEIDSGRQQEFESKLAVALAEL
RAQHEEQVHIYKEELEKTYNSKLENARHSAERNSNMVGAAHEELQQTRVRLEGMTSQLSH
LQKQLTASEAKVRELEETLTRERDLMRRRLEDKDREMAEIRARMQQQLDEYQELLDIKLA
LDMEIHAYRKLLEGEEERLRLSPSPSFTKVTVARSSGSSRLHHSSAVASSSRNSSGASSS
KKRRLNDNDSETSSMVGGTVTKARISQHASASGRITVDEVDLEGKFIRLSNKADEDQSLS
NWQLKRQVGSGAPIVYKFPHKFTLKAGASVTVWAASGGGSHKPPTDLVWKSQSSWGSGDL
LQTTLINANGEEMASRKVTRTLFQDDEDEEGAHSTSGADDHAEYNLRSRTVVCDSCGQSS
DRSGGLAEGLVGQSYFMGTNEPRQGRVKPENCSVM
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccccgagccagaaaataggccgcagagccgtgtccccggcccgcatcaccagg
ctgcaggagaaggaggagctgtgcaacctcaatgaccggctggccgtctacatcgacaag
gtgcgctccctggagtcggagaacgcttcgctgcggctgcggatctccgagtccgagtcc
gtggtcacccgcgacctgtcgggcatcaaggccacctacgagacggagctgtccgacgcc
cggaagaccctggaccaggtggcgaaagagcgagcgcgactgcagctggagctgggaaag
atcagggaggagcacaaggagctgaaagccaggaacgctaagaaggtgtcggacctggag
gcggcgctggtccggctccgggacctggaggccatgctgaactccaaagacgccgccttc
accaccaccctgggggagaagaggggtctggaggccgaggtgaaggagctgaaggcccag
ctggccaagctggacatcagcttggccgacgtgaagaagcagctgcaggacgagatgctg
aggagagtggacgccgagaaccgcctgcagaccctgaaggaggagctggagttccagaag
aacatctctgctgaggagctgcgcgagtccaagcgtcgccacgagtctcgcatggtggag
atcgacagcggccggcagcaggagtttgagagcaaactggccgtggctctggccgagctg
agggcgcagcacgaggagcaggtccacatctacaaggaggagctggagaagacctacaac
tccaagctggaaaacgcccgtcactcagctgagaggaacagcaacatggtcggagctgct
cacgaggagctgcagcagacccgggttcgtctggagggcatgacgtcccagctgagccat
ctgcagaaacagctgacggcaagtgaggctaaggtgcgcgagctggaggagaccctgacg
cgagagcgcgacctgatgaggcgacgtctggaggacaaagaccgagagatggcggagatc
cgagcccggatgcagcagcagctggacgagtaccaggagctgctggacatcaagctggcc
ctggacatggagattcacgcttacaggaagctgctggagggagaggaggagaggctgcgt
ctgtcccccagcccctccttcacgaaggtgaccgtggcccgctcgtccggctccagccgc
ctgcaccactcctccgccgtggcctccagcagccgcaactcctccggcgccagcagctcc
aagaagcggcgcctgaacgacaacgacagcgagacctccagcatggtgggcggcaccgtg
accaaggcccgcatcagtcagcacgcctcggccagcgggcgcatcaccgtggacgaggtg
gacctggaggggaagttcatccgcctgagcaacaaggctgacgaggatcagtctctgagc
aactggcagctgaagcgacaggtggggagcggcgcccccatcgtctacaagttcccccac
aagttcaccctgaaggccggagccagcgtgaccgtctgggctgcctctgggggaggaagc
cacaagccccccactgacctggtgtggaagagccagagctcctgggggtccggtgaccta
ctgcagaccaccctcatcaacgccaacggagaggaaatggcctcgaggaaagtgacgcgc
acgttgttccaggatgatgaagatgaagagggagctcacagcacgagcggagcggacgac
cacgccgagtacaacctgcgcagccgcaccgtcgtctgcgactcgtgcggtcagtcgtcg
gatcgcagcggcgggttggccgaaggcctcgtgggacagtcctacttcatgggaaccaac
gagccccgacagggccgagtgaagccggagaactgctccgtcatgtaa
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