Nematolebias whitei (Rio pearlfish): 119409256
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Entry
119409256 CDS
T08042
Symbol
scn1ba
Name
(RefSeq) sodium channel, voltage-gated, type I, beta a
KO
K04845
voltage-gated sodium channel type I beta
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04261
Adrenergic signaling in cardiomyocytes
nwh04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
119409256 (scn1ba)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
119409256 (scn1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119409256 (scn1ba)
Ion channels [BR:
nwh04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
119409256 (scn1ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
ig
Ig_3
Ig_CD22
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
119409256
NCBI-ProteinID:
XP_037532036
LinkDB
All DBs
Position
5:complement(6208565..6224095)
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AA seq
222 aa
AA seq
DB search
MSAELQLLLLPLTLLALQAAPGHGACVEVDSDTEAVAHEGFKLGCISCKMRGEVPATAVV
NWFFRASDESEFAPLYTYQNKNGEIIDPRFYERLDWNGSKRTQDLQDGSIYILNVTFNDT
GTYMCTFERTLIYTNYEFQTNTSKIIHLNVVPKLTRGMASILSEVMMYVSIIGLQLWLLV
EMIYCYRKISAAGEEALRESEAEYLAIASESKENCAAEQEAE
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagaactccagctgctcctgctgcctctcaccctcctggcacttcaagcggcg
ccgggccacggggcctgcgtggaggtggactcggacacggaggccgtggcccacgagggc
ttcaaactgggctgcatctcctgcaagatgagaggcgaggtgcccgccacggccgtggtc
aactggttcttcagggcttcagacgagagcgagttcgctccgttgtacacctatcaaaac
aaaaacggcgaaatcatcgaccctcgtttctatgagcgactggactggaacggcagcaag
cggacccaggacctgcaggacggctccatctacatcctcaatgtgaccttcaatgacacc
gggacctacatgtgcacctttgagcgcacgctcatctacaccaactacgagttccagacc
aacaccagcaagataatccacctcaacgtggtgccgaaactcaccagagggatggcgtcc
atcttgtctgaggtgatgatgtatgtctccatcattgggctgcagctctggctgctggtg
gagatgatttactgctacagaaagatctctgcggctggagaggaagctctgagggagagc
gaggccgagtatttagccatagcatcggagagtaaagagaactgtgcagccgagcaggag
gcagaataa
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