Nematolebias whitei (Rio pearlfish): 119409261
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Entry
119409261 CDS
T08042
Symbol
cspg5a
Name
(RefSeq) chondroitin sulfate proteoglycan 5 isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nwh00535
]
119409261 (cspg5a)
Proteoglycans [BR:
nwh00535
]
Cell surface proteoglycans
Others
119409261 (cspg5a)
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Gene cluster
GFIT
Motif
Pfam:
Neural_ProG_Cyt
TMEM213
Motif
Other DBs
NCBI-GeneID:
119409261
NCBI-ProteinID:
XP_037532040
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Position
5:6600148..6665354
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AA seq
530 aa
AA seq
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MRGQKEASVFPGCWRPTLLWCLLLLHLLPLPAHGALAGTNDTETEDKANITSPFIEEDGP
GKLNEVITTVTGMSNSATSDPISTVNPRAGRAPRGDKEDDQSSGMFGETLVPTVEEVSVV
APPQISPDSAETEHLLPSSPHVPEVMEGEEEREEEEEHLPHTSPPWIPAKDTAMFDLDHL
TTTTAAPPPATTNPTNPSNPDVLHVDFFDPSSRGRNLDLDPPSPSSLAHELQGGDATSWA
MPENYDYITPYEDGVSPTVDEYTYSTTTDAYESDEDLREAAGSPARSRPRLPGSGSFFPG
IGIPVPSVRGAANPALSSNGCRAGYQMVNGSCRSACEMQPNYCFNGGQCYQLDGEDIFCR
CNVQDYIWHKGARCESVVTEFQVMCLAVGASALVLLLLFMIIVCFAKKLHVLKTENKKLR
KRSSKYRPSSEQHNDNFSLSTIAEGSHPNVRKLCDTPPNVPHARALAYYDNIICQDDPHS
QNKLEDPVKAPPKEDDALNIHNSLTPKHENHKVLGEENSSEVNSLQNNMM
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcggggacagaaggaggcgagcgtcttcccgggatgctggagaccaacgctgctgtgg
tgcctcctgcttctgcacctcctcccgctgcccgcgcacggggctctcgctgggaccaat
gataccgagacagaggacaaagccaacatcacctctccatttatcgaggaggatgggcca
ggaaagttgaacgaagttatcaccacggtaacaggaatgagcaactccgccacctctgac
ccgatcagcactgtgaacccgagagcgggccgggcaccacgtggagacaaggaggacgac
cagagcagcggcatgttcggtgaaacgctggttcccacggtggaggaagtgagcgtggtg
gcaccgcctcagatcagccctgattcggctgagacggagcacctgttgcctagcagtcca
catgtacctgaagtcatggagggagaggaggagagggaggaagaggaggaacatttgcct
cacaccagcccaccttggatccctgccaaggacactgccatgtttgatctggaccaccta
accaccaccactgctgccccaccaccagccaccaccaacccaaccaacccgtccaatcca
gatgtcctccatgtagacttctttgacccctcctcccgtgggcgtaaccttgacctagac
cctccttccccttcatctctggcccacgagctgcaaggcggcgatgcaacttcctgggca
atgccggaaaactatgactacattactccctatgaagacggcgtgtcccccactgtcgac
gaatacacctacagcaccacaaccgatgcttatgagagtgatgaagatcttcgagaagct
gctgggtctcctgctcgttccaggccccggctcccagggtctggctccttcttccctggc
attggcattcctgtacccagcgttcgtggcgcggcaaacccagccctttcatctaacggg
tgcagagcgggctaccagatggtaaatggaagctgccgctcagcctgcgagatgcagccc
aactactgcttcaatggaggacagtgctaccagctggatggggaggacattttctgcaga
tgcaacgtccaggattacatctggcacaagggcgctcgctgcgagtcggtggtgaccgag
ttccaggtgatgtgtctggctgtgggcgcctcggctctggtgctcctgctgctcttcatg
atcatcgtctgcttcgccaagaagctccacgtgctcaagacggagaataagaaattgcgc
aagcgcagcagtaagtaccggccttcatcggagcaacacaatgataatttctcgctgtcc
accatcgctgagggctcccacccaaatgtaaggaaactgtgcgacacccctcctaacgtc
cctcatgcccgtgcattggcttactatgataacattatctgtcaggatgatcctcattcc
cagaacaagctggaggacccagtcaaggccccgcccaaggaagacgacgccctcaacatc
cacaactctctgacccccaaacacgagaaccacaaggtcctgggcgaggagaactcctcg
gaggtaaactcactgcagaacaacatgatgtga
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