Nematolebias whitei (Rio pearlfish): 119409262
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Entry
119409262 CDS
T08042
Name
(RefSeq) sterol regulatory element-binding protein cleavage-activating protein
KO
K26682
sterol regulatory element-binding protein cleavage-activating protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119409262
Membrane trafficking [BR:
nwh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
119409262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SCAP
SCAP_N
Sterol-sensing
WD40_Prp19
WD40_CDC20-Fz
Patched
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
119409262
NCBI-ProteinID:
XP_037532046
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All DBs
Position
5:6686398..6725232
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AA seq
1271 aa
AA seq
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MTLREQLREKISVAFYRHGLLCASYPVPIILFTSASILTCCYPLLRLPLPGTGPVEFTTG
VRDYSVPSHEPHGDLERPDWYHGPPVAYIQQVLVKAAVSPWDSNLVPVDVFRSPLGKVFS
LLEEIRNHVHTDSSGIRSLESLCLQVTDLFPGLRRMQSVLPEHGCLVVSPGNYWQNQREL
FDSDPDLLKTIQKHEPKGLHTSATLRDLLFGILGKYTGVSHYNRKRVVTYTITVVLSSYD
ASFLGSLRTRLKQLHPSANCSLRDDHMVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTR
KIDMVKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLENVLVL
TKSVVSTPVDLEVKLRIAQGLSNESWSIMKNMATELCIILIGYFTLVPAIQEFCLFAVVG
LVSDFFLQMFFFTTVLSIDIRRMELADLNRRLPAEAGLPPPKPGPLRPREVPPPPRPSPH
TITLQTPAFRNLRLPKRLRVVYFLARTRLAQRIIMAGTVIWIGILVYTDPAGIRTYLAAQ
VSEQSTLGDPGGGGLPPHLAVVPVFRGGDPTSTLSIHSAPDPTPLPENQSQGHHGSARGG
SLPLAPPAVPQISWGVEDDEGWRRLSFRHWPSLFSYYNITLAKKYISILPVIPVTIHLTP
QEAIDMRHPQDTRHPPPPIPKVSVDLQTDLTLYKVAALGLAAGVLLVLLLFCLYRVLCPR
NYGQNGVSHGRRRRGDLPCDDYGYSPPVSEISPLLLRGHSMDIECLASDGMLLASCCLAG
QIRVWDAQTGDCLTVIPKQGLRRSSSSGCWEQRDVWDNISGTTESDCEPRDPSICCDGIP
EDKSYPLRCRSSPTRPPLFTDQPDLTPLIDTNFTSQPPCNPSTPPRGGFDFGGLVERAYM
EHESPSPSTYPSASSASSSPPSGAQVQRSPSLGDSAGLLNPEKDSVTGTQASAASGDWES
AVWAMELRGNLIAAGRSSGKLELWDAVEGSLRCSNEDGVSGITALAFLNNRIVAARLNGS
LDFFTVEINKPLGLLQYRGGPGRGSVPPSPCYSSEDLISCQLTRSVQCAHQKPITVLRAA
AGRVVTGSQDHTVRVYRLEDSCCLFTLQGHSGGITAIYIDQTMVLASGGQDGAICLWDVL
TGSRVSHVYGHRGDVTSLVCTTSCVISSGLDDIICIWDRSTGIKLYSIQQEVGCGASLGV
ISESLLVTGGQGCVSFWDLNFGDLLQTVYLSPSGDGQGVRQLLVLDNAAIVCDFGSELSL
VYVPSVLEKLD
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgcgagagcagctgagagagaagatatcagtggccttctaccgccacgggcta
ctgtgtgcctcctacccagtacccatcatcctcttcacctccgccagcatcctcacctgc
tgctatccgttactgaggcttccactgcccgggacaggtcctgtggaattcaccacaggg
gtgcgagactacagcgtcccttctcatgagcctcatggagacctagaaaggcctgactgg
taccatggacctccggttgcctacatccagcaggtgttggtgaaggcggcggtgtctcca
tgggacagcaacctggtgccggtagatgtgtttcgatcgcctcttggaaaagtctttagt
ctgctggaggagatccgcaaccatgtccacactgacagctctggcattcgcagcctggag
tcgctgtgtctccaggtgacggacctgtttccagggttacggcggatgcagtcggtgctg
ccagaacatggctgtctggtcgtctctccgggcaactactggcagaatcagcgggagctg
ttcgactcggatcctgacctcctgaagaccatccagaaacatgaaccgaaaggactgcac
acctcggcaacgctgcgagatctgctgtttggcattcttggaaaatacacaggagtcagt
cactacaacaggaagagggtggtgacgtacacgatcactgtggttctttccagctacgat
gcaagttttctcggcagcttgcggacccgtctgaaacagcttcacccctccgccaactgc
agcttgagagatgaccacatggttcacgtccacttcaaagaggagatcggcatcgctgaa
ctcattcccctcgtcaccacttacatcatcctcttcgcctacatctacttctccactcgt
aagatcgacatggtgaagtccaagtggggtctggctctggctgctgtggtcacagtcctg
agctctcttctcatgtctgtgggactgtgcacgctgtttggactcacaccaacactcaat
ggcggcgagatcttcccttacctggtggtggtgatcggcctggaaaacgtgttagttctc
accaaatctgtcgtttctactcctgttgaccttgaggtcaaactccgtattgctcagggc
cttagtaatgagagctggtctatcatgaagaacatggctactgagctgtgcatcattctc
attggatatttcacactggtgccggctatccaggagttctgtctttttgctgtcgtggga
ctggtttccgatttcttcctgcaaatgttcttttttacaacagtgctatctatagatatc
cgccgcatggagctggctgacctgaaccgccgcctgccagccgaagctggtcttccccct
ccaaaaccaggccccttgcgaccacgtgaggtcccccctccaccacgaccgtccccacac
acaattaccctgcagaccccagccttcaggaacctgaggctccccaagaggctacgagtg
gtttacttcctggctcggacacgtctggctcagcggatcatcatggctggcacagtgatc
tggatcggcatcctcgtctataccgacccggcagggattcggacctacctggctgcacag
gtgtccgagcaaagcactctaggagaccccggaggaggtggtctgcccccccacctggca
gtagtgcctgtttttcgcggtggggatcctaccagcaccttgagcatccactctgcacct
gatccaactcccttacctgagaaccagtcacagggccaccacggctcagccagaggagga
tctcttcccctggccccacccgctgtccctcagatctcctggggggttgaggatgatgaa
ggatggaggagattgtctttcaggcactggccatcacttttcagctactacaacatcact
ttagcaaagaagtacattagcatcttacctgtcattcctgtcaccattcacctgactccc
caggaggccattgacatgcgccaccctcaggataccagacaccctccgccccccatcccc
aaagtctctgtagatttacagacggacctcaccctctacaaggtggcagccctgggcctg
gctgcaggcgtcctgctagttcttctgctcttctgtctctaccgagttctgtgccctcgt
aactacggccagaacggtgtctctcatgggcgccggcggcgaggcgacctgccctgcgac
gattacggttattcaccgcctgtcagcgagatctcgccgcttctgctaaggggccacagc
atggacattgagtgtttggccagtgatgggatgctgctggccagctgttgtctggctgga
cagatccgtgtttgggatgctcagactggagactgtctgactgtcattccaaagcaagga
ttaaggcggagcagcagcagtggctgctgggagcagagagacgtttgggacaatataagc
ggcaccaccgagtcggactgtgaacctcgagacccctccatctgctgcgacgggataccg
gaggacaagagttaccctctgagatgccgcagctcacctacccgcccgcctctgttcacc
gaccagcccgatctgacgccgctcatcgacaccaacttcacctcccagccaccgtgcaac
ccctccacaccacccagaggaggctttgactttggaggactggtggagcgtgcctacatg
gagcacgagtccccatcaccttccacctacccctctgcttcctcagcctcctcctcacct
ccttcaggagctcaggtccagaggagtccaagcttaggggactcagctgggctcttgaac
ccagagaaagactctgtaactgggacacaagcatcagcagcgtctggagactgggagagt
gctgtctgggccatggaactgagagggaacctgatagctgctggaaggagcagcggcaaa
ctggagctgtgggatgcagttgaagggtctctgcggtgcagtaatgaagatggagtctct
gggatcacagctctggccttcctcaacaacagaattgtggcggctcggctgaacgggtcc
ttggatttcttcacagttgagatcaacaaacctttaggccttctgcagtacagaggtggc
cctgggcgaggcagcgtgccgccttctccttgttacagcagcgaagacctgatcagctgt
cagctcacacgctctgtgcagtgcgctcaccagaagccgatcacggtgctgcgagcggcc
gccggcagggtcgtcaccggcagccaggaccacacagtccgggtttaccgactggaggac
tcgtgctgcctctttactctgcagggccactctggagggatcacagccatctatattgat
cagacgatggttctggccagcggcgggcaggacggcgccatctgtttgtgggacgtcctg
acaggaagccgtgtcagtcacgtctacggtcaccgtggcgacgtcacctcgctggtctgc
actacctcctgcgtcatcagctcaggactggatgacatcatctgtatctgggaccgcagc
accgggatcaaactgtactcgatccagcaggaggtgggctgcggggccagtctgggggtg
atctccgagtctctgctggtgacggggggtcagggctgcgtctccttctgggacctgaac
ttcggcgacctgctgcagacggtctacctgagcccgagcggcgacggtcagggcgtccgg
cagctgctggtgctcgacaacgccgccatcgtctgcgacttcggcagcgagctcagcctg
gtctacgtgccttcggtgctggagaagctggactga
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