Nematolebias whitei (Rio pearlfish): 119409264
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Entry
119409264 CDS
T08042
Symbol
sema6e
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E
KO
K06842
semaphorin 6
Organism
nwh
Nematolebias whitei (Rio pearlfish)
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GFIT
Motif
Pfam:
Sema
PSI
Herpes_US9
Motif
Other DBs
NCBI-GeneID:
119409264
NCBI-ProteinID:
XP_037532048
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Position
5:complement(6830256..7023615)
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AA seq
1083 aa
AA seq
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MRLMPKLPQPILPAFLALTVVAFLPQLSSGAAPFPQDLEPISIVGRESSYLYPSFQGLMS
DNDTLRLGLDFQRMLRINHMLYIAARDHVFAINLAMSSDQIIPQQKLTWKTKDVEKCTVR
GKNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMSTLEQEGEEVVGQARCPFESR
QSNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIEYG
NYVYFFFSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDS
FFYFDVLQSLTNVLQINHRPAVLGVFTTQANSITGSAVCAFYMDDIEKAFNGKFKEQRNS
ETAWTPVPEEQVPKPRPGSCAGEGSAAAYKTSTTFPDETLTFIKSYPLMDESVPSVNDRP
FFTRTTSRFKLTQIAVDTSAGPYKNYTVVLLGSDNGHVLKLLASTEGANASFSTQLLEDI
DVYNPNKCNVRGEDRRVLGLELDRDHHALFVAFSSCVIRVPLSRCSEYSTCKKSCLSSRD
PYCMWLKSGSCVPVSPGFKGGFEQDVENGYHQHPDTCHDVLATTRKQNTALDSVYGKTTP
TSASTTRHGAAFPKEAGDSERGTGPDRLPPVGEQGSPDSEPISVEMEGVRRPPELERTNH
SVHYTLLIACVLVAFVLGAFVSGFLVSCYCNHTGHKTKKLSKDPEASIPHALSLRSLAKL
NGLLDSQSKEDKELSSPKIYNSFFTNSKEHHAPRRNIHHGMTMGDLVHPHNHHFHTSSEL
SGLPTPDSTPELPIKSMKAFKNQWEKNQNCNNAKEPKSHNIGSRPSSALLHQQVYPYSHG
LSNGQPVGHLHPEERKIHNVERVLSQPYPSYSQKVMEVTSLDELLKHIHDANASKTSQLM
SPSGLMATGGGGQLAFSNRIQPHIPETESAPYYSSSTLPRDSLTRRMDVPPDIPSHHQST
LERRHSSQRQSLIAAATKMPSVGAVGGGMIPRQHSFNQRNGGPHQPPLLLAQMNSTGSTC
EVHYPLIPNAYLTRQHSYNGEQLEVQHRGAIVRRASSLKPDVPPKPLFIPATSPVNEQGK
FNY
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgatgcccaaactgcctcagcccatcctgccagccttcctggctctcactgta
gttgcctttttacctcagctgtcctcaggagcagcaccatttccccaagacctggaacca
atcagcattgtgggaagagaatcttcgtacctctaccccagcttccaggggctcatgtca
gacaacgacacactccgcctgggcctggacttccaacgtatgctgagaatcaaccacatg
ctttacatcgctgcccgggaccatgtgtttgcaatcaatctcgccatgtcatctgatcag
ataatcccacagcagaaactgacgtggaaaacgaaggatgtggagaagtgcactgtgaga
gggaagaacagcgatgaatgttacaactacattaaagtgctggtaccacgtaatgacgag
actctgtttgcctgcggcacaaacgccttcaatcccacctgccgtaactataagatgtcg
acgctggagcaggaaggagaggaggtggtgggacaagctcgatgtccctttgagtcccgc
cagtccaacgttggtctttttgcaggtggtgatttctactctgcaaccatgaccgacttc
ttggccagtgatgcggtcatttacagaagtctgggtgaaagtagtcccgttttacgtacc
gtcaaatatgactccaaatggctaagagaacctcatttccttcacgccattgaatatggg
aactacgtgtactttttcttcagcgagatagctgtggagtacaccactctaggaaaggtt
gttttctccagagtcgcgcgcgtttgtaagaacgacaacggtggctccccgagggttctg
gaacgatactggacatctttcctcaaagcccgtctgaactgttccgtgcccggagactct
ttcttttattttgacgtcctgcagtcactgaccaacgtcctgcagatcaaccaccggccg
gctgtccttggagtttttaccacgcaggccaacagcatcactggctcagcagtctgtgcc
ttctacatggacgacatcgaaaaggccttcaacggtaaattcaaggagcagaggaacagc
gagacggcttggacacctgttccagaggagcaagtccccaagccgagaccaggcagctgc
gccggcgagggctctgcggccgcctacaagacttccaccaccttccctgatgaaacgctg
accttcatcaagtcctatccactcatggacgagtccgttccttcagtcaacgacagaccc
ttcttcacccgcaccaccagcaggttcaagctgacccagattgcggtggatacctcagca
ggaccgtataagaactacaccgtggtgctgctgggttcagataacggccatgttcttaaa
ctcctggccagcaccgagggagccaatgcatctttcagcacccagctcctggaggatatt
gatgtctacaaccctaacaagtgcaacgtgcggggcgaggacagacgggtgcttggcctc
gagttggaccgggaccatcatgcactgtttgtggcgttctccagctgtgtgatccgtgtc
ccgctcagccgctgctccgagtatagcacctgcaagaagagctgtttgtcttcacgggac
ccttactgcatgtggctcaagtcaggcagctgcgtgccggtgtcacctggattcaaaggc
gggtttgaacaggatgtggagaacggctaccatcagcatcctgatacctgccacgatgtg
ttggcgaccactcgcaagcaaaacacagcgctagattcagtgtatgggaagaccaccccc
acaagcgccagcactacccgccatggggcggcattcccaaaggaggcaggtgactctgaa
agaggtacaggtcctgatcgccttccccctgtgggggaacaagggtcacctgactcagag
ccaatcagtgtggagatggagggtgtgagacgacctccagagctggagaggaccaatcac
agtgtccattacacccttctgatagcttgtgttttggtggcctttgttcttggagccttt
gtctctggatttctggtctcgtgctactgtaaccacacaggccacaagacaaagaaattg
tccaaagatcctgaagcctcgatcccacatgcgttgtcgctccgcagtctggcaaagctc
aatggtctcctggacagccagagtaaggaggacaaggagctgtcgtctccaaaaatctac
aattcatttttcactaacagcaaagagcatcacgcacccaggagaaatatccaccatgga
atgacaatgggagatctggttcaccctcacaatcatcacttccacacctcctcagagctg
tctggtctgcctacaccagactcaacccctgaactgcccatcaagagtatgaaagccttt
aagaatcaatgggaaaagaaccagaactgcaacaatgctaaagaaccaaagtctcataac
attggctccaggcccagttcagctctgcttcaccagcaggtctacccttactcccatggc
ctgtccaacgggcagccagttggtcacctgcatccagaagaacgtaaaattcacaacgtt
gagcgcgttttatcacagccttaccccagctactctcagaaagtgatggaggtaacatcg
ctggatgagcttctgaagcacatccatgatgcaaacgccagcaaaacctcccagttaatg
agcccatcaggcctgatggccactggaggaggaggacagctcgccttttccaacagaatt
caaccacatattcccgagacagaatcagccccttactacagctcctctactttaccccgg
gacagtctcactcgtcgcatggacgttcctcctgacatcccctcgcaccaccagtccact
ctagagaggaggcactcctcccagcggcagtcactgatcgctgcggctaccaaaatgccc
agtgtgggtgcagtcggaggaggaatgatcccccggcagcacagcttcaaccagcggaac
ggtgggcctcaccaaccacctctccttctggcacagatgaactcgacaggcagcacttgt
gaggttcactatcctctcatcccaaatgcgtacctgacacgccaacatagctataacgga
gaacagctggaggtccagcacagaggtgccattgtccgccgggcatcctctctcaaacct
gatgtccctcctaagcctctgttcataccagctacatctccagtcaatgaacaaggaaaa
tttaactactga
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