Nematolebias whitei (Rio pearlfish): 119409316
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Entry
119409316 CDS
T08042
Symbol
clstn3
Name
(RefSeq) calsyntenin-3
KO
K22661
calsyntenin 3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119409316 (clstn3)
Cell adhesion molecules [BR:
nwh04515
]
Cadherins
Cadherin related
119409316 (clstn3)
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
DUF5570
Motif
Other DBs
NCBI-GeneID:
119409316
NCBI-ProteinID:
XP_037532119
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Position
5:complement(14679222..14708292)
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AA seq
958 aa
AA seq
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MDRMNFLSFLLLCLTSVANGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFRVHNGPLGSGSVQFEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDC
GEGPDGVNSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDRIVRVEALDADCS
PQYSQICFYDIITPSVPFAIDNDGNIKNTEPLDSKRQRVHTFWVTAFDCGKNRAQADAQV
VVTVKPSCKPGWIGWTKRVEYTPGSGSIPLFPSLHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTAALPTLPSSDSSLVFSFNGSNHVAA
VPDSIVSTLSGDHFTLQLWMRRGGANIQASTTQSRGNRKDEETIVCSTVKNDDSYSHYSL
SVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTFDPAL
IHDNGAIPNPAPRQRMLIGACWELEEKQKEILNNTIPEGKDSVKYVGGYHGLLSGVTVRP
GSVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAVQQVT
YRNSLRFATPGVRPLKLSTSLRCFNEESCLSLKQLEGYLVVLQPDAPQISLSGVGPHLAR
PAPEFEGPRGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPLGEEL
NPEREELLVDMDVVRERGLEIINTTAYIAITGAESISVYEDVLRSVRYRLAKGSARFERR
FRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHHAGELSGHTLPN
PHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRGDSARGGPKEGSSQWDDSALT
IIVNPMESYESRMGISADTEGEGEGEEDEEVAESPDDASDDQRIIIKKECRDGNARRY
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgaattttctctccttccttctcctttgcttgacttcggttgccaatggc
aacaaagccaataaacacaagccatggatcgagacggagtaccaggggatcgttatggag
aacgacaacaccgtcctgctcaacccccctctctttgccttggacaaagatgccccactt
cactatgctggtgaaatctgtggttttcgggttcataacggtcccttgggttcaggatca
gtccagtttgaagccgttgttctggaccgctccaccggcgagggtttggtccggtccaag
gagccgctggactgtgagagtcagcgggaacacagcttcaccatccaggcctacgactgc
ggagaaggacctgatggagtcaacagcaagaaatctcacaaagccactgtgcatgttcgt
gtaaacgacgtcaacgagttctcccctgtgtttgtcgagcgtcgctacgaggcttcggtc
ccagaggggcgtctgtttgaccgaatcgtacgcgtggaggctctggatgccgactgctcc
ccgcagtacagccagatctgcttctatgacatcatcactcccagtgtgcccttcgctatt
gacaacgacggtaacattaagaacactgagcctttggattcaaagcggcagcgcgttcac
accttctgggtgactgccttcgattgtggaaagaatcgtgctcaagctgatgctcaggtt
gtcgtcacagtcaagccgtcctgcaaacccggctggatcggatggacaaagcgtgtagaa
tacacaccagggtcaggaagcatccctctgttccccagcctgcatttggagacttgtgaa
gagacggtgtggaacatccaggccactgtagagctccagactggccacattggaaagggc
tgtgacagagacagctactccgatagatctgtacgccgcttgtgtggtgccgtcaggggt
gaagtagacctcctcccacctccatctcctgcagccaactggactgctgctctgcccact
cttccctcttctgattcatctctggtcttttccttcaacgggtcgaatcatgttgcagcg
gtgccggattcgatcgtgtccacactgtcaggtgaccatttcaccctccagctgtggatg
cgcaggggtggtgccaacatccaggcttcaaccacacagtccaggggaaatcgcaaggat
gaggagactattgtgtgcagcaccgtcaagaatgatgactcctactctcattactccctt
tccgtccacggctgccgtctctccctcttctactggcccgacgtctcggctgcacggccc
gtcaagttcttgtggaaactggagcaggtgtgtgacagtgagtggcatcatctctccctc
agtgtccagttcccatcagtgactctctatgtggatggtgtgacctttgaccctgctctc
attcacgacaacggagccatccccaaccctgcaccccgtcagaggatgctcattggcgcc
tgctgggagctcgaagaaaagcagaaggaaatattaaacaatacaatcccagaggggaaa
gactcagtgaagtacgtgggtggctaccatggcctgttgtcgggggtgacggtgcgtccg
ggtagcgtggagcctcacagcgtggtggagtgtctttacgcctgcagggaggggctggac
tttggagatctggagaccctggggtctggaatgaaggtccacgtgaacccgagtcagtct
gtgttggtgctggagggagacgacattgagagcttcaatcgggccgtgcagcaggtcacc
tacagaaactcgctgcgcttcgccactccaggagtccgtcctctcaagcttagcacctct
ctgagatgtttcaatgaggagagctgcttgtccctcaagcagctggaaggatatctggtg
gttctccaacccgacgcccctcagatctctctgtctggggtcggtccacatctggcccgt
ccagctcctgaattcgaaggtccccgtggcgttcccctgttcccggagctccggatcgtc
tgttcgctgtcacatgctgtcaacacagctgcgcaggggatggagggtggagctctgatg
tctgatgccgtggctcacacgctggatggttgtgaggtgcagccactgggggaggagtta
aacccagagagggaggagcttctggtggacatggatgttgtgcgagagcgaggactggaa
atcatcaacacgactgcttacattgccattacaggtgctgaatctatctctgtttacgag
gacgtccttcgctcagtccgataccgcctagccaaaggctctgctcgctttgagaggcgg
ttccgcctgtcctgctctgagatgaacggcagatacacgagcaacgagttgactctggag
gtgaacttcctccactctttggacagtctgtaccacccgtcccacctgctggcctcacag
cagcagttcctccatccgtcccaccatgctggagagttgagcggacacactttgccaaat
ccacaccgcaactcagtggttccaggagcagcgaccgtcatcatcatggtgtgtgtgggt
tttctggttgtcatggtgatcttgggtgtcttccgaattcgctctatccaccgtcgaggt
gacagcgccaggggcgggcccaaggagggaagcagccaatgggacgactcagcgctcacc
atcattgtcaacccaatggagtcctacgagtctcgtatgggcatctctgctgatacggag
ggggagggggagggggaggaagacgaggaggtagcagagtcgcctgatgacgcaagtgac
gaccagcgaatcatcatcaagaaggagtgcagggacggaaacgcccgtcgctactga
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