Nematolebias whitei (Rio pearlfish): 119409358
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Entry
119409358 CDS
T08042
Symbol
emg1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119409358 (emg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nwh03009
]
119409358 (emg1)
Enzymes [BR:
nwh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
119409358 (emg1)
Ribosome biogenesis [BR:
nwh03009
]
Eukaryotic type
90S particles
Other 90S particles
119409358 (emg1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
119409358
NCBI-ProteinID:
XP_037532166
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All DBs
Position
5:15087751..15089305
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AA seq
238 aa
AA seq
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MAAPGGRKRGLEHLDEYEPKFVKVGKSNLHDRMTEKRLVVILEGASLETVKVGKTFELLN
CDQHKSMIIKNGRDPGNVRPDITHQCLLMLMDSPLNRAGLLQVYIHTEKNALIEINPQTR
IPRTFARFCGLMVQLLHKLSVRAADGSAKLLKLIKNPVSDHLPPGCPRIATSFAAGEPVC
PRTLVTDGPAAVVIGAFAHGSVNVEYTEKTVSLSNYPLSAALTCAKISSAFEEVWGVM
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccggtggaaggaagcgtggtcttgaacatttggacgaatatgaaccaaaa
ttcgtcaaagttggcaaaagcaaccttcacgaccgaatgacagaaaaaaggctagttgtt
attctggaaggagcctcattagaaacagtaaaggttggaaagacgttcgagttgttgaac
tgcgaccaacacaaaagtatgatcatcaaaaatggaagggacccgggcaacgtaaggcca
gatatcacacatcagtgcctgctcatgctgatggacagtccactgaacagggcaggtctg
ctgcaggtttacatccacacagaaaaaaatgctttaatagagatcaacccacagactcgc
atcccaagaaccttcgctcgcttttgtggcctgatggttcagctgttgcacaagctgagc
gtcagagctgctgatggttctgcaaagctgttaaagttgattaaaaatccagtgtcggac
cacctgccgcccggttgcccccgtatcgccacctcattcgcagctggggaacccgtctgt
ccccggactttggtaacggatggccctgctgcagtagtgattggagcgtttgcacatgga
tcggtgaatgtggaatacacagagaagaccgtgtccctaagtaactaccccctctctgca
gcactgacctgtgccaaaataagctctgcttttgaggaagtttggggtgtcatgtga
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