Nematolebias whitei (Rio pearlfish): 119409408
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Entry
119409408 CDS
T08042
Symbol
cldn12
Name
(RefSeq) LOW QUALITY PROTEIN: claudin-12
KO
K06087
claudin
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03272
Virion - Hepatitis viruses
nwh04382
Cornified envelope formation
nwh04514
Cell adhesion molecule (CAM) interaction
nwh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
119409408 (cldn12)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119409408 (cldn12)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119409408 (cldn12)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119409408 (cldn12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nwh03037
]
119409408 (cldn12)
04147 Exosome [BR:
nwh04147
]
119409408 (cldn12)
Cilium and associated proteins [BR:
nwh03037
]
Other cilia and associated proteins
Stereociliary proteins
119409408 (cldn12)
Exosome [BR:
nwh04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
119409408 (cldn12)
Exosomal proteins of colorectal cancer cells
119409408 (cldn12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Clc-like
Motif
Other DBs
NCBI-GeneID:
119409408
NCBI-ProteinID:
XP_037532218
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All DBs
Position
5:18499529..18503049
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AA seq
372 aa
AA seq
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MSCRDIHATNAFSFIIAFVSVCGIVVATFIPQWRVTRLVTFNRNAKNISVYDGLWAKCVK
QDGYSGCYYYDSEWYSKVDQLDLRLLQFCLPAGLMFGSLALLLCMAGMCKTCCCSDKPEP
DIKTTRCLVNSAGCHLVAGTFLFLGGAIAIAPSVWFLFRTKEMNIRYDKIFSDGFAVYVS
IGCSGGLMLAALLIFMWYCMCKKLPSPFWLPLPSLNASPSTQPLTANGFPPSPVYGPQIL
PPQFPPTVMETQPYVPSQGYVQSVMAPVPAQVYVSQVSAHDGYGSEVGGYAPSQSYAPSQ
SYPPXXXAPSQSYAPSQSYAPSQSYAPSQSYAPSQSYAPSSQYASSYTGRRYSSRSRMSA
IEIDIPVLTQPE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgccgggacatccacgctaccaacgcgttttccttcatcattgcctttgtgtct
gtgtgtgggatcgtcgtggccacatttatcccacagtggcgtgtgacgaggctcgtcacc
ttcaaccgtaatgccaaaaatatcagcgtgtatgatggattgtgggccaaatgtgtgaaa
caggatggatattcaggatgttactactatgattcagagtggtactctaaggtggaccag
ctagatctgcgtctcctgcagttctgccttccagcgggcctcatgttcggctctttagcc
ttgctgctttgcatggctgggatgtgtaaaacctgctgctgctcagacaagcctgaacca
gacattaaaactaccaggtgcctggtgaacagtgcaggctgtcacctggtggctgggacg
ttcctgttcttgggaggagcaattgccatcgcaccctcagtatggtttctgttccgcacc
aaggagatgaacatcagatatgacaagatcttctctgatggctttgctgtgtatgtatcc
ataggctgctctggaggactgatgctagcagcactgctcatttttatgtggtattgtatg
tgtaagaagctgccttcacccttctggttgcctctgccatccttgaatgcttctccatcc
acccagcctctcacggccaatggctttcccccttctccagtttatggtccacagattttg
ccaccacagtttcctcctacggtgatggaaacccagccttatgtgccttcgcaagggtac
gtgcaaagtgtgatggccccggttccagctcaggtgtacgtgtctcaagtttctgctcat
gatgggtatggatcagaggtagggggctacgccccctctcagagctacgccccctctcag
agctaccccccnnnnnnnnnngccccctctcagagctacgccccctctcagagctacgcc
ccctctcaaagctatgccccctctcagagttacgccccctctcagagttacgccccctcc
tctcagtatgcatccagctacacgggccgccgctactcctcccgctcacggatgtcggcc
atagagatcgacattcctgtactaacccagccagagtaa
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