Nematolebias whitei (Rio pearlfish): 119409501
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Entry
119409501 CDS
T08042
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119409501
03036 Chromosome and associated proteins [BR:
nwh03036
]
119409501
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
119409501
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
119409501
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
119409501
NCBI-ProteinID:
XP_037532317
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All DBs
Position
5:25001404..25026605
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AA seq
558 aa
AA seq
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MDKYEDLGLEASRFIEDLNMYEASRDGLFRMRRDAGNNPDFEETRRVFASKMTKIHMQKQ
QEEMAMSGQLVKMNGGPSSGHPNNRPPPNSSRQPAEAAAKPPILSGPSPGNQLDGYKHQT
GSQFDPVSRAHSYGNNDDNLELLEMHSYQNPSPTNCGNLARHPVSPPVAWSPSKEIIMTP
PAVESGSSASQKQPQLIQTPTTSQSQSPARVWPAEPMDPAKPDKTRAALALSAFTGGADF
HVQPVAHYIPPSNSPTSHNGPVLASASSETTQPKVSVTNSAALCPGNVPKTQGLGLSPVL
ATAQVISGEAEGPQSLLTQPSEQGPSAAEIKLEALTKQLEKEMDAQKKTDYFGVCVKCKK
AVYGSSQACQAMGSLYHDTCFTCSACSRRLRGKAFYYVGGKVFCEEDFLYSGFQQSADKC
NACGHLIMDMILQALGKSYHPGCFRCIICNESLDGVPFTVDTENKIYCVKDYHRVLAPKC
AACNQPILPSEGSDETIRVVSMDKDYHVECYHCEDCEMELNDEEGHRCYPLNGHLLCHSC
HLKHIQPGCPPSIPASSF
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgaggatttagggttggaagcgagtaggttcatcgaggacttgaacatg
tatgaagcatccagagatggcttgtttcgaatgaggagggatgcgggaaataaccccgac
tttgaagaaacgagaagagtttttgcctctaaaatgactaaaatacacatgcagaagcag
caggaggaaatggccatgagcggccagctcgttaaaatgaatgggggtcccagcagcggg
caccccaacaacagaccgccccccaacagctccagacagccggctgaggcggcggccaaa
cccccgatcctctctggcccctcgcctggaaaccagcttgacggttacaagcaccagact
ggttcccagtttgatccagtcagcagggctcactcctacggaaacaatgacgataatctg
gagctcttggagatgcattcataccagaacccttctccaaccaattgtggaaaccttgcc
aggcaccccgtgagcccaccagttgcttggtccccctccaaagagatcatcatgacaccc
ccagcagtggagtcagggagcagcgcatcccagaagcagcctcagctcatacaaacgccc
accaccagccaaagtcagagtccagccagggtttggcctgcagagccaatggacccagca
aaaccagataagacgagagctgccttggctctgagtgctttcacaggaggggctgacttc
catgttcagcccgtggcacattatatacctccttccaactctccaaccagtcataatgga
ccagttttagcttctgcatcatctgaaacaacccaaccaaaagtctcggtgactaattct
gctgctctgtgccccggcaatgtccccaaaacacagggtctaggtctgagcccagtactt
gccacagcgcaggtcatcagcggggaagctgaaggcccccagtctctgctcacgcaacca
tctgaacaggggccctcagcagcagaaataaaattagaggctctcacgaagcaactggag
aaagagatggatgcccaaaaaaagacagactactttggagtgtgtgtgaagtgtaagaag
gcagtttatggatccagccaggcctgccaggccatgggaagcctctaccacgacacctgc
ttcacctgtagcgcctgcagtcgaaggttgagaggaaaagctttctactatgttggagga
aaggttttctgtgaagaggacttcctgtactccggcttccagcagtctgctgacaagtgc
aacgcgtgtggacatctgatcatggacatgatcctgcaggctcttggaaaatcataccac
cccggctgtttccgctgcatcatctgtaacgagagccttgacggagtacctttcactgtg
gacactgaaaataagatatactgtgtcaaagactaccacagagtgctggcgcctaaatgt
gctgcctgtaaccagcctatcctgccctcagagggctcagatgaaactataagagttgtt
tccatggacaaagactatcacgtggaatgttatcactgtgaggactgcgagatggagctg
aacgacgaggagggccaccgctgctaccctctgaacggtcacctgctctgccactcctgc
cacctgaagcacatccagccgggctgccctccatccatccctgcctcctccttctaa
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