Nematolebias whitei (Rio pearlfish): 119409510
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Entry
119409510 CDS
T08042
Symbol
irx4a
Name
(RefSeq) iroquois-class homeodomain protein IRX-4a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119409510 (irx4a)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
119409510 (irx4a)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
119409510
NCBI-ProteinID:
XP_037532328
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Position
5:complement(27297790..27303594)
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AA seq
475 aa
AA seq
DB search
MSYPQFGYPYSSAPQFLMTTNSLTTCCESTARSIADSGVAASGQTPVYCPVYESRLLATA
RHELSSAAALGVYGSPYTGGQGYGNYVTYGTEASAFYSLGTFDTKDATASAHAGITQAAA
YYPYDPTLGQYQYDRYGSMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKGSEEKRYDDDEDGSQEEQIKSENNDDGQ
SRAEKELQLSDLEDFEALESESSECELKHRYHLNAHMAADCSAEQLIKSASLKLSIPAPL
GGTEQDLGKTCLKSNPEDFQSDSRQQQVKSCYNNNPNSQQQLLDGKPRIWSLAQTATSLN
QTEYPSCMLRCQLASPPPSASLTPSPVASSPVTGPNSSRQQDSPVTTLRNWVDGVFHDPL
FRHSSGLSQAVGSNNPVSWSTNTKGAMLEAAGLQQHQDPPKDMSFPKTVNKLFCS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatccacagtttggatacccatattcgtctgctccacagttcctgatgaccacc
aactctctgaccacttgctgcgagtccacggccagatccatcgccgactccggagtagca
gcgtccgggcaaacccccgtctactgcccggtgtacgagagccggctgctggccacggcg
aggcacgagctcagttcagccgccgcgctgggggtgtacgggagcccctacaccggagga
cagggatatgggaattacgttacatacggcacggaagcgtcggctttctactcgctgggg
acgtttgacactaaagatgccacagcttctgcgcatgcgggaatcactcaagcagctgcg
tactacccctatgatcctaccttgggacagtatcagtacgacagatatgggtccatggat
gggggcacgaggcgaaagaacgccacccgtgagaccaccagcaccctgaaggcctggctg
caggagcaccggaagaacccgtaccccaccaagggggagaagatcatgctggccatcatc
accaagatgaccctgacgcaggtctccacctggttcgccaacgccaggaggaggctcaag
aaggagaacaagatgacgtggccccccaggaacaaggggtcggaggagaagagatatgac
gatgacgaggatggctctcaggaggagcagattaaaagcgagaataacgatgatggtcag
agtcgggccgagaaggagctgcagctgagcgacttggaggacttcgaggcgctggagtct
gagagctccgagtgcgagctgaagcaccggtaccacctgaacgcgcacatggccgccgac
tgctccgcggagcagctcatcaagagcgcctctctcaagctctccatccccgctcctctc
ggggggaccgagcaggacttgggcaaaacttgtctcaagtcaaacccggaggacttccag
tcggacagcaggcagcagcaggtcaagtcgtgttataataacaacccgaacagccagcag
cagctgttggacgggaagccgcgcatctggagtttggcgcagaccgccacgtccctcaac
cagactgaatacccgtcctgcatgctcaggtgccagcttgcgtcgcctcccccttccgcc
tctctcaccccgtcccccgtcgcctcctcccccgtgaccggcccgaacagcagcaggcag
caggactcgccggtcacgacgctgaggaactgggtggacggggtcttccacgaccccctg
ttcaggcacagctcgggtctgagccaggctgtgggcagcaacaaccccgtgtcctggagt
acgaacaccaaaggcgccatgctggaggcggcgggcctgcagcagcatcaggaccccccc
aaagacatgagcttccccaaaactgtcaacaagctgttctgctcctaa
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