Nematolebias whitei (Rio pearlfish): 119409600
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Entry
119409600 CDS
T08042
Name
(RefSeq) DENN domain-containing protein 4B
KO
K20163
DENN domain-containing protein 4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119409600
Membrane trafficking [BR:
nwh04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
119409600
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
PPR_2
PPR_3
DUF2464
PPR
SPA
Motif
Other DBs
NCBI-GeneID:
119409600
NCBI-ProteinID:
XP_037532427
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All DBs
Position
5:complement(1489894..1533457)
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AA seq
1301 aa
AA seq
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MTEEKCPQLVDYFVVAGLDPGGPWRTLDEDGKTSSSSCLSMRVVEPVTDLVVIARGLGED
VPEGFTCIEKTLGGHSAELSAGLINNPHLYLCYRRGRDKPPILDLGVLYEGKESLKQGWY
VIETTPYSRSASLSSAGAPTAHRVFLTYRRALDSQGLHSLGITDVALLLPSKGEVAPHTF
CRIDKNLNTGMWGPALYVCYKRAVAKANSLLFEAGLISRYPEEDLDSFPLPESVPVFCLP
MGVSVESWPLNTKYQLPVFSTFVLTSASGDKVYGAAIQFYESFCRDLLSERQSIQLGLLS
VVDRRPISSRSLHVKKSICVLSHWPFFTVFQKFLTFIYRYSISGPHVLPLEKHISSFMHN
VPFPSPQRPRILVQLSPYDNLLLCQPVSSPLPLSGASFLKLLQNLGPESTCTLLLAVLIE
HKLLLHSLRPDVLTSVSEALVSMTFPLRWLCPYIPLCPLQMADVLLAPMPFIVGVHSSYF
DLHDPPAEVMCVDLDTNTIFQSEEKKPLSWRSLPRKHGKTLFNTLTTLHRTLEKIPSQLS
TNHKCQNCDQNLMSGKSQMEPVLMIQMYGSSHLTVAPLSHDLHLTDGRLVCYRILMQLCG
QYGEPVLAVRVLLEMKKAGITPNTITYGYYNKAVLESKWPSTNQGGRLRWVKLRNVLLAV
AQFRRPIRRRQKSDSVGSRADVVTDPDMKLRPHLIRQSSWTGLSQSSSHESLTGSLIKSS
SLSSMKMPRDDVRPCRRTVLPDAKMNGCGDPVSQKPPLGQRNVSAPPLVPLCGVVVPRSQ
VCLSTFYSECAESADSELDCSYPPEDRDGRSERVTDSAHRNPRSERVTDSAHRNKTVDEN
SNNVSSPSRGGLTGKLQQLLTPTRLRASSRRAVSMDNRRSGGAGGGGTGRRISEQRQSRK
SQVTETLLKAKERLANATSESSLSVGSDLDLSDTPTQAFPLRRSWDSNQDAAGIEVLMSS
CSLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCGASFVPFLNAEICDLGPVSSAERCNL
NLEDEVESAVRPPSGPQAPLRHHCNGLSDDSSSETSSYSETSRTTTVPSVGGTPQVTVAY
LSPLVLRKELESLLQNDGEAVLAQPQFLDSHSIIFWNLVWFFQRLGLPSNLLQLVRNSAL
VSHFTQSENSSVRVRLLWDTLTPDTDQWPPLYVLWRIHSGVPMRSYSWRRHNHPFSLSFL
EEVLRWVGMNEVHKAVTLLLDTLAKQPGTPSIQRSLYREFLFLTLAAMGKDHVAAFDKKF
RAAHARLSSSLGREELRRKRAEPPSSKAIDCRRSFHPPLEC
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggagaaatgtccccagttggtggactactttgtagtagcgggtctggaccct
ggtgggccctggaggactctggacgaagacgggaagacctcctcctcctcttgtttgtcg
atgcgggtggtggagccggtgacagacctggtggtgatcgctcggggtcttggggaggat
gtcccagagggttttacgtgcattgagaagaccctgggtggccactcagcggagctgagc
gccggcctcatcaacaacccgcacctgtacctgtgctaccgccgaggacgggacaaacct
ccaatcctggacctgggggttctgtacgaggggaaggaatctctcaaacagggctggtac
gtcatagagacaacgccctacagccgctcggccagcttgagctcagcgggcgctcctacg
gctcaccgtgtcttcctgacctaccgccgggctctggactctcagggtcttcactcgctg
ggcatcaccgacgtcgccctgctgctacccagcaaaggggaggtggcgccgcacactttc
tgtcggattgacaagaacctcaacacgggcatgtggggtccagctctgtacgtgtgctat
aagagagccgtagccaaagccaactccctgctgtttgaagctggtctgatcagccggtac
ccggaggaggacctggactcgttccctctgcccgagtcggtgccggtgttctgtctgccg
atgggtgtcagcgtggagagctggcccctcaacaccaagtaccagctgcccgtcttctcc
accttcgtcctgacgtccgcgtctggggacaaggtttatggtgctgccatccagttctac
gagtcgttctgcagggatcttctgtcagagcggcagagcattcagctcggcctgctcagc
gtggtggaccggcgtcccatcagcagccgcagtctccatgtcaagaagagcatctgtgtc
ctgtcccactggcccttcttcaccgtcttccagaagttcctcaccttcatctacagatac
tccatctctgggccgcacgtcctgcctcttgaaaaacacatctccagcttcatgcacaac
gtcccgtttccgtcccctcaacgtcctcggatcctcgtccagctctcaccgtacgacaac
ctgctgctctgccagcccgtctcctcccccctccccctcagtggcgcgagcttcctgaag
ctgctgcagaacctcggtccagagagcacgtgcacgctgctgctcgccgtcctcatagaa
cacaaactgctgctgcactcgctcagacccgacgtcctcacctccgtcagcgaggccctc
gtctctatgaccttccccctgcgctggctctgcccctacatccctctgtgcccgctgcag
atggccgacgtcttgctggcgcccatgcccttcatcgtgggcgttcactccagctacttt
gaccttcacgaccccccagctgaggtgatgtgtgtggacctggacaccaacacaatcttc
cagtccgaggagaagaagccgttgtcatggcgatcgttgcccagaaagcacggcaagact
ctgttcaacacgctgaccactctccacagaaccctggagaagataccttctcaactctcc
acaaatcacaagtgccagaactgtgaccagaacctaatgtcaggcaagagccagatggag
cccgtgttgatgatccagatgtatggatcttcacacctgaccgtggcccctctgtcacat
gaccttcacctgacagacggacgactggtgtgttaccggatcctcatgcagctgtgcggt
cagtacggggagccggttctggcggtccgggtcctcctggagatgaagaaggctggaatc
accccgaacactatcacctacggatactacaacaaggccgtcctggagagcaagtggcct
tcgaccaatcagggaggccgtctccgctgggtcaagctgaggaacgtcctattggctgtg
gctcagttcagacgaccaatcagacggcggcagaagagcgactctgtgggctccagagca
gacgtggtgacggatccggacatgaagctccgcccacacctgatccgtcagtccagttgg
accggtctgagccagagttccagtcatgagtctctgactgggtctctgattaagagcagc
agcctgagcagcatgaagatgcccagagacgatgttcgaccttgtaggaggactgtcctc
cctgatgccaagatgaatggttgtggagatcccgtctctcagaaacctcctctgggacag
cgaaatgtctccgcccctcctctggtgcccctctgtggggtggtggtcccccgaagtcag
gtctgcctgtccaccttctactcagagtgtgccgagtctgcggactcagaactggactgc
agctacccacctgaggacagagacggcaggtctgagagggtgacagactccgcccacagg
aaccccaggtctgagagggtgacagactccgcccacaggaacaagactgtagacgagaac
tccaacaacgtgtcgtctccgagccgaggaggtctgacaggaaaactgcagcagctcctc
acgcccaccagactccgagcgtcgtcacgcagagcagtcagcatggacaaccggaggtca
ggaggagcaggaggaggagggacaggaagaagaatatcagagcagaggcagtccaggaaa
tctcaagtgaccgaaactctgctgaaagccaaggagcgcctggcgaacgccacgtccgag
agctctctgtctgtaggaagtgacctggacctgtcggacacgcccactcaagcgttccct
ctgcgcaggtcatgggactccaaccaagacgcggcagggattgaggttctgatgtccagc
tgctcgctgtgccgcagctgcaactctttggtttacgacgaggagatcatggcgggctgg
acgtcagacgactccaacctgaactcgtcctgcccgttctgcggcgcctccttcgtgccg
ttcctgaacgcagagatctgcgacctcggacccgtcagcagtgcggagcgctgtaacctg
aacctggaggatgaggtggagagtgccgtgaggccccccagtggtccgcaggcccccctg
cggcaccactgcaacggactgagcgacgactcgagctccgagaccagcagctactctgaa
accagcagaaccaccacggtgccgtcagtgggcgggactccccaggtgacggtggcctac
ctgagccctctggttctgaggaaggagctggagagtcttctgcagaacgatggcgaggcg
gttctggcccagcctcagttcctggacagccactccataatcttctggaacctggtctgg
ttcttccagcggctcggcctgcccagtaacctgctgcagctggtccgaaactctgcgctg
gtcagccacttcacacagtcggagaactcctcggtccgagtcagactcctctgggacacc
ctgacacccgacacagaccagtggcccccactctacgtcctctggaggatccacagtggc
gtcccgatgaggagctatagctggaggagacacaaccacccgttctccctgtctttccta
gaggaggtgctgcgctgggtgggcatgaacgaggtgcacaaggccgtcactctcctcctg
gacacactggccaagcagccagggacgccgtcgatccagaggagtctgtacagagagttc
ctgttcctcacgttggcagcgatgggtaaagaccacgtggcggccttcgataagaagttc
cgggcggctcatgctcgtctcagcagctctctggggagggaggagctccgcaggaagagg
gcggagcctcctagctccaaagccatcgactgcagacgtagcttccacccccctctggag
tgctga
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