Nematolebias whitei (Rio pearlfish): 119409617
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Entry
119409617 CDS
T08042
Symbol
col28a1b
Name
(RefSeq) collagen, type XXVIII, alpha 1b
KO
K23619
collagen type XXVIII alpha
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nwh01002
]
119409617 (col28a1b)
Peptidases and inhibitors [BR:
nwh01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
119409617 (col28a1b)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Kunitz_BPTI
DUF1194
Motif
Other DBs
NCBI-GeneID:
119409617
NCBI-ProteinID:
XP_037532445
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Position
5:3470441..3495393
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AA seq
1208 aa
AA seq
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MLLQRCLSRGLGLCLLLFALLHDATGQRRQTARRKNYKLNDDGGDSYEKKSQQAEGSACS
LAVAFILDSSESTKLILFEQQKAFVLRFSTRLTMLQVTGWDLKVRIAALQFSSSVSVEHR
FTDWKDLDSFQGKVDAMGYIGQGTYTTYAITNASQLLMQETPKDSVRIAVLMTNGVDHPR
NPNVLAAAAEAKGRGIRLFTVGLSDVAQQSENTDKLRAIASSPAHQFVQSLQDPQLEEKL
LKEMGAVALEGCPHNQVCLCKKGERGLQGKPGRKGDPGDRGLLGLKGARGEPGFNGQPGS
DGPQGRPGYKGNKGERGECGAPGEKGNTGAEGPTGAPGPKGEQGVTGPAGDPGPEGPLGS
KGDRGPIGVPGPPGDFRIGFPGTKGEKGLQGRPGPSGPAQTGEPGLPGIPGPLGLQGNPG
PPGDGFPGPKGDRGFEGPRGNRGPPGVGVKGDKGNHGPPGLQGPVGAPGFGLQGEKGDQG
PVGPAGPRGAPGVGVPGSKGNQGPPGEPGQPGERGVGAPGPKGDPGAQGSAGVPGLPGED
GSPGQKGDTGASGPRGPEGAPGKGAPGEKGDKGDRGSRGQPGPFGPEGSTGPKGEPGKLG
LPGPSGPPGRGSPGAKGEPGPSGPAGAVGESGLGLPGPKGDRGPPGPLGLPGLKGEGFSG
PQGPPGLPGLPGEIGPEGVGLPGPKGDRGIPGPPGPAGPPGVGLIGLKGSVGPTGPHGPP
GLPGEGSQGQKGEPGFQGIPGPRGPPGQGLQGDKGERGLRGDKGKKGDRGTPGEPGDAGP
AGRVGQKGEPGLTRDEVIRIVRSICSCGVKCSQTPLELVFVIDSSESVGPENFNVIKDFV
NAAVDRVSVGGDAVRVAVVLYSHINAVVVSLEQEASQDEIRSAVRSMTYLGEGTYTGSAL
QRANWVLGAARAGVRKVVVVITDGQADRRDPVSLESAVTEAKENEIEMFVIGVVNESDPL
SELFKKELSFMASDPDRDHMVLVADFNVLQALEKKLLTCIFQDRRNNLFGPIPSFMLLPG
IPEVFGNVLEPQPYETDADVPTFTGDLEKVQTKPGSPASHSDRVLVHPHRPKPDEDRTTS
ETQRFPFFDREPFRPVTEFLPQFDINKLYMTEAVGPDGSTQRAPTKKELPVPWPPSPPPP
PPRPSDPHTSAEGCSQILDPGPCRDYVVKWYYDETSNACAQFWFGGCLGNKNQFETEEKC
LKTCVKFY
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgcagaggtgcctgagcagaggtctggggctctgccttctgctgttcgctctt
cttcacgacgccaccggccagagaagacagacggcacggaggaaaaactacaaactgaac
gatgatggaggagacagttatgagaagaagtctcaacaagctgaaggttcagcgtgctcg
ctggcggtggcgttcatcctggacagctctgagagcaccaagctgatcctgttcgagcag
cagaaggccttcgtgctgaggttcagcacccgcctcaccatgctgcaggtgaccggctgg
gatctgaaggtgcggatcgccgcgctccagttcagcagctccgtgtccgtcgagcacagg
ttcacggactggaaagacctggactcttttcaagggaaagtcgacgccatgggctacatc
ggccaaggcacctacaccacctacgccatcaccaatgcctcccagctgctgatgcaggag
acgcccaaagacagcgtcaggatcgcggtgctgatgaccaacggggtcgaccatcctcgt
aaccccaacgtgttggcggctgcagcggaggccaaaggtcgcggcatcaggctcttcact
gtcggcttgtcggatgtggcccagcagagcgagaacaccgacaagctccgcgccatcgcc
agctcacctgctcaccagtttgtccaaagtctgcaggaccctcagctggaggagaagctg
ctcaaggagatgggagcagttgctcttgaagggtgtccgcataaccaggtgtgtttgtgt
aaaaaaggagagcggggccttcaaggaaaacctggccgtaaaggagatccaggagacagg
gggctgctgggtctaaaaggagcgaggggcgagcctggatttaacggtcaacctggaagt
gacggccctcagggacgtcccggctataaaggcaacaagggggagagaggagagtgtggc
gctcctggagaaaagggcaacaccggagcagaaggaccaacaggagcaccaggaccgaaa
ggagaacagggtgtaacaggaccagcaggagacccgggtcctgaggggccactgggatcc
aaaggagaccgggggcccatcggggtgcctggacccccaggagacttcaggattggattt
ccaggaactaaaggtgaaaagggccttcaggggagacccggaccttcaggtcctgctcag
actggagaaccaggactacctggaataccaggaccactcggattacaaggaaaccctgga
ccgcctggagatgggtttccaggaccaaaaggggatcgagggtttgaaggtccacgagga
aaccgtgggcctcctggggttggggtcaaaggtgacaagggtaatcatggaccaccaggg
cttcaaggtccggttggtgctcctgggtttgggcttcaaggtgaaaagggagaccagggc
ccagttggacctgcaggaccaagaggagctccaggtgttggagtaccaggatcgaagggg
aaccagggccccccaggtgagcccgggcagccaggtgagcgaggggtgggagcgccagga
cccaaaggagaccctggagctcagggttcagctggagtaccaggtctaccaggggaggat
ggaagtccgggacaaaagggcgacaccggtgcgtcggggcccagagggcctgagggggct
ccgggtaaaggagctcctggtgagaagggagacaaaggggacagggggagccggggacag
cctggaccgttcggtcctgaggggtcaacggggccaaagggggaaccaggaaaacttgga
ctgccaggacccagtggacccccaggcagggggagtcctggtgccaaaggagaaccgggc
ccatcgggtcctgctggagctgtgggagagtcgggactcggtctacctggacccaagggc
gacagaggaccaccaggacctcttggactacctggactgaaaggtgaagggttctctgga
cctcaggggcctccaggacttcctggtcttccaggggagatcggacctgaaggcgtcggt
ttacctggaccaaagggggacaggggcatacctggaccacctggacctgctgggccacca
ggagttggtctgattggtcttaagggttctgttggtcccacgggtccacacggtcctcct
gggttacctggagaaggatcacaaggtcaaaagggggagcctggatttcaggggattcca
ggacccagaggtcctccaggacaaggtctgcagggcgacaagggagaacgaggactgaga
ggagacaaaggcaagaagggagaccgaggaacacctggagagccaggagacgctggacct
gcgggcagagttggacagaagggagaaccgggactcacgagggatgaggtcatcagaatc
gtcaggtccatttgcagttgtggggtgaagtgcagccaaaccccgttggagctggtgttt
gtgattgacagctctgagagcgtgggccctgaaaacttcaacgtcatcaaagactttgtg
aacgccgcggtggaccgggtgtcggtcggcggggacgccgtgcgtgtagccgtggtcctc
tacagccacatcaacgccgtggtggtcagcctggaacaggaagccagccaggacgagatc
aggtctgcggtgcgctccatgacctacctgggcgaggggacctacaccggcagcgccctc
caacgggccaactgggtgttgggggcggcccgggcgggcgtgaggaaggtggtggtcgtc
atcaccgacgggcaggccgatcggagggacccggtcagtctggagagcgccgtgacagaa
gctaaagaaaacgaaatcgagatgtttgtgatcggggtggtgaacgagagcgaccctctc
tccgagctcttcaagaaggagctgagcttcatggcctcggaccccgacagagaccacatg
gtcctggtcgcagactttaacgtcctgcaagctctggagaagaagctgctgacctgcatc
ttccaggacaggaggaacaatttattcggccccatcccgagtttcatgcttctccctggg
atcccagaggtcttcggtaacgtccttgaaccgcaaccgtacgagacggacgcagacgtg
cccaccttcacaggagacctggagaaggtccagacgaagcccggctctccggcgtcccac
tcggacagggtgctggtccacccgcacagaccgaaaccagacgaggacagaaccacctca
gagactcagaggttcccgttctttgacagggaacccttcagacccgtaacggagttcctc
ccacagtttgacataaacaaactctacatgactgaagccgtggggccggatggttccaca
cagagggccccgactaagaaagagctgccagtaccatggccaccatctccaccacctcca
ccaccgaggccctcagacccccacacatcagcggagggctgcagccagatcctggaccca
ggaccttgccgggactacgtggtgaagtggtactacgatgagacgtcgaacgcctgcgct
cagttctggttcggaggctgtctgggaaacaaaaaccagtttgagaccgaggagaagtgt
ctcaaaacctgcgtcaagttctattga
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