Nematolebias whitei (Rio pearlfish): 119409746
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Entry
119409746 CDS
T08042
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119409746 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119409746 (rad54b)
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
119409746 (rad54b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ResIII
Motif
Other DBs
NCBI-GeneID:
119409746
NCBI-ProteinID:
XP_037532574
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All DBs
Position
5:18858964..18887815
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AA seq
608 aa
AA seq
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MRRSGAPSQLFGNAMKKPRFVPPGASGSCFVPEPKPLTPKSVPCNALDKIQRNISTPVVS
KSTFNVQTKTSQPAPAVSNVLARVLGATDSKENEAETKYQNSESEDRTESKNAAGVNESP
QWDPGSPRTPLPSAGSERVCEASGPAPGCVQDGVRYFSVVWCKASKKKHKRWEGDAVLVT
RGRSVVLKDMEGKNIGTGSGYKMSQLASLSEGETLMIGGKEVEVMGIISAEDFAKGRCFQ
DVQIDQVESCTKSAPPPSHRLASKPFSPPTMLGRAGHPETKAEEEQVYNPRHNPQAPGAL
VMPHPSSNHQWLYNKSGLPVVDVVVDPHLTTHLRPHQREGILFLYECVMGLRAVGRYGAI
LADEMGLGKTLQSVALSWTLLKQGPYGGKPVTKRVLVVTPGSLVQNWKAEFTKWLGRERI
SVFTVDQDHRIEQFVLSPLHNVLVISYEMLLRCLEQVRHVHLLVTGVKCTLEERIFQRQV
SKQGLSGTVVDLGKGAEHTSFSTNELQDLFSLTDTPCLTHDLLNCGCNMDGSVSEVVVEE
VEQVSHRPCQLGRQGDRKEAAQKHLSMSELMQWRHFSGDTHTFSDPYLDHARSHITFAFQ
TTISHTDQ
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgctcaggagctcccagtcaactttttggcaatgcaatgaaaaaacctcgattt
gtaccacctggggcatctggttcatgttttgtgcctgaaccgaagcctctgacgccgaaa
tctgttccatgcaacgcgctggataagatccagaggaacatttcaacaccagttgtgagt
aaatcaacttttaatgtccagaccaaaacaagccagcctgctccagctgtttccaacgtc
ctggctcgagttctcggcgctacagatagtaaagaaaacgaagctgagacgaagtatcaa
aactctgaatcagaagatcgcacagagagcaaaaatgcagcaggagtaaatgaaagtcct
cagtgggatcctggttctcctcggacccctctgccttctgcagggtcagaacgagtctgt
gaagcttcaggcccagcccctggctgtgttcaggatggcgtgcgttacttcagtgtggtg
tggtgtaaagccagtaagaagaaacataagcgctgggagggggatgcagtgctggtcaca
agaggacgctcggtcgtactcaaagacatggaagggaagaatattggaacgggcagtggc
tacaagatgtcacagctggcctcgctgtctgaaggagaaacactgatgattggaggaaaa
gaggtagaggtgatgggaatcatttctgctgaggactttgctaaaggccgatgtttccag
gatgtccaaatagatcaagtggagtcgtgcacaaagtccgctccgccgccttctcatcgc
ttggcttctaaacctttcagtccacctacaatgttgggcagagcagggcatccagaaaca
aaagcagaagaggaacaagtctacaatcctcgtcacaacccacaagctccaggtgcacta
gtgatgcctcacccctcttccaaccaccagtggctttataataaatcagggcttcctgtg
gttgacgttgtggttgatccacacctgaccacacatctgcggcctcaccaaagagaaggc
atccttttcctctacgagtgtgttatgggcttgagagccgtgggtcgttatggcgccatc
ctggctgatgagatgggactgggaaagactctccagagtgtggcattgtcctggacgttg
ctcaaacaggggccttacggtgggaaaccagtgacaaaacgcgtccttgtggttacacct
ggcagccttgtgcagaactggaaagctgagttcaccaagtggctgggacgtgagaggatc
agtgtttttactgtggatcaggatcacagaatagagcagtttgtgttgtcccctctacac
aacgtgcttgtgatcagctatgaaatgctgctgcgctgcctggagcaggtacgacatgtt
caccttcttgttacaggagttaagtgcaccctcgaggagcggatatttcagaggcaggtg
tccaaacagggcctgtcagggactgttgttgacctggggaaaggagcagagcacacaagt
ttctccacaaatgaactccaagatctgttcagcctgacagacactccgtgcttgactcac
gacctgctgaactgcggctgcaacatggacggttctgtcagcgaagtggtggtggaagag
gtggagcaggtttctcacagaccttgccagctcggtcgtcaaggggaccgcaaggaggca
gctcagaagcatctgagcatgtctgagctcatgcagtggagacacttttctggagacaca
cacaccttctcagacccttacctggatcacgctcgaagccacatcaccttcgctttccag
accaccatctctcacacagatcagtaa
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