Nematolebias whitei (Rio pearlfish): 119409840
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Entry
119409840 CDS
T08042
Symbol
psmc4
Name
(RefSeq) 26S proteasome regulatory subunit 6B isoform X1
KO
K03063
26S proteasome regulatory subunit T3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
119409840 (psmc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nwh03051
]
119409840 (psmc4)
Proteasome [BR:
nwh03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
119409840 (psmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
AAA_2
AAA_16
RuvB_N
AAA_22
nSTAND3
DUF815
NPHP3_N
AAA_28
RNA_helicase
Mg_chelatase
AAA_14
TIP49
NTPase_1
NACHT
ATPase_2
CENP-F_leu_zip
AAA_lid_PRS2_C
AAA_3
IstB_IS21
TsaE
AAA_7
AAA_33
Parvo_NS1
AAA_17
AAA_25
AAA_24
NB-ARC
AAA_18
ABC_tran
DUF3450
Bag6_BAGS
Motif
Other DBs
NCBI-GeneID:
119409840
NCBI-ProteinID:
XP_037532671
LinkDB
All DBs
Position
5:6234292..6243491
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AA seq
417 aa
AA seq
DB search
MDDSVVVEKCPEEMPSMLTSRPQTGLSFLAPEPEDLEDLYTRYKKLQQELEFLEVQEEYI
KDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDR
ELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAV
ELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG
EGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ
NVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE
DYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggatgactcggtagttgttgaaaagtgcccggaagaaatgccctcaatgctaacctcc
agacctcagacgggtctgtccttcctggcaccagaaccagaagacctggaggacctttac
accagatataagaagctgcagcaggagctagagttcctggaggtgcaggaggagtacatc
aaagatgaacagaagaacctaaagaaggagttcctgcatgctcaggaggaggtgaagagg
atacagagcatccccctggtcatcggccagttcctggaggctgtggaccagaacactgcc
atcgttggctccaccacaggctccaactattacgtgcgcatcctgagcaccatcgaccgc
gagctgctgaagcccaacgcctcagtggcgctccacaaacacagcaacgccctggtggac
gtccttcctcctgaggccgacagcagcatcatgatgctgacgtcagaccagaagcccgat
gtgatgtacgcagacattggtgggatggacatccagaagcaggaggtccgggaggccgtg
gagctgcctctcactcacttcgagctctacaaacagattggtatcgacccacccagaggg
gtcctcatgtacggacctccaggctgcgggaagaccatgttggccaaggctgtggcccac
cacactacagcggcgttcatccgtgttgtgggttcggagtttgtccagaagtatctgggt
gaaggtcctcgcatggtgcgggacgtcttcaggctggccaaggagaacgctcccgccatc
atcttcatcgatgagatcgacgccatcgccacgaagcgatttgacgctcagaccggagct
gacagagaagtgcagaggattttactggagctgctgaatcagatggacggctttgatcag
aacgtcaatgtcaaggtgatcatggccaccaacagagcagacaccctggaccccgccctg
ctccgtccgggacgtttggacagaaagatcgagttcccgctgcccgaccgcagacagaag
cgtctcattttctccaccatcaccagtaaaatgaatttgtctgaggaggtcgacctggag
gactatgtcgcccggcccgataagatctctggagccgacatcaactccatctgccaggag
gccggcatgttggccgtgcgtgagaacaggtacatcgttctcgccaaggacttcgagaag
gcctacaagaccgtcatcaagaaggacgagcaggagcacgagttctacaagtag
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