Nematolebias whitei (Rio pearlfish): 119409870
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Entry
119409870 CDS
T08042
Symbol
bcan
Name
(RefSeq) brevican core protein
KO
K06795
brevican
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nwh00535
]
119409870 (bcan)
00536 Glycosaminoglycan binding proteins [BR:
nwh00536
]
119409870 (bcan)
04091 Lectins [BR:
nwh04091
]
119409870 (bcan)
Proteoglycans [BR:
nwh00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
119409870 (bcan)
Glycosaminoglycan binding proteins [BR:
nwh00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
119409870 (bcan)
Lectins [BR:
nwh04091
]
C-Type lectins
Lecticans
119409870 (bcan)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
Ig_3
I-set
ig
Motif
Other DBs
NCBI-GeneID:
119409870
NCBI-ProteinID:
XP_037532702
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Position
5:complement(8578580..8601792)
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AA seq
1219 aa
AA seq
DB search
MNLDVPPSVLLFSLCLLFLPSLATLHHESDDSKLLQVTIPINPPVIAVLGGSLTLPCLVS
LALPPPSPSTNGRHAVLTVPRVKWSVLTEDRETEILVARGDRVRVSEAYKDRASLLNYAY
SPADLTLRLQNLRQNDTGFYRCEVQQGLEDADDVAQVKVKGVVFHYRDASSRYAFTFEQA
RKACEEIGAEIASPEQLLAAYHSGYEQCDAGWLSDQSVRYPIQMPREGCFGNMDGTPGVR
NYGLLELDELYDVYCYVENIHGEVFHGSAPQRFTFGEAKAYCVSHGAELASTAQLYAAWS
DGLNHCSPGWLADGSVRYPIVIPRERCGGGEPGVKTIYRYSNQTGFPDVHSQHDVYCFNS
DYSPYTESPQGFLATEPEDIGQDIIFLTTQQDVSLSETMSKETEEMNNAPTYDPTKQHNE
AAVKENPPQFVAPSSKPRENPSTKDTGELVKVSHPDSFQLAPEEDPHTDREVPPTSPSFD
GLSVDNETFLTTDGTTFESTPPTEEHISEAKSPDWLVYSPTSEADLDEEHHEGSDLPVSQ
EDHTTDVASDHPSVTESAVLGKLEEVTTDSVVESSPHTEEGGARSTTPLPSITNSTYEDQ
SVESEEETRDLTDDNLMDLNISSIAEEVPASNSSFDPIHESAVMVNHDDDDDDEEEFKHT
SDGPTEQSGYADPVEIPRAEVVQLTAEINSSTDASVLIKKLFSSPVSVTVSPSSVEVEAS
SSEAVTFQHESDFSSDAEPQEETRDETDQEDLEESPSVQNFTDDGSGEGEREEAHESSWE
TPQRKSELFLTNPTLSADHTSEGIIDEAGTNAPPQSKTKITLVPHQSFTPSWEPEPSTQT
PEESLSDREYSAELPVHEESDEISQEQRFTTAASKARAEPVTEGHEADPTTDEPSGNICT
WLPEEEEASRSAFTTNSDVTITAPTVHPEHFGDVVREHTAMGPSLPAEKVSATSQGDSCL
DNPCLNGGTCVDGESLRCFCLPGYGGHFCQTDMEECEPGWDKFQGFCYHHFSRRQSWEAA
EQHCRLCGGHLLSVMTPEEQDYVNDKYREYQWIGLNDRTIEGDFRWSDGNPLLYENWYKG
QPDSYFLSGEDCAVMVWHDGGRWSDVPCNYHLSYTCKKGASSCGDPPRVPHAQVYGKKRL
RYETNSRVRYYCKEGFVQKLNPVITCLPGGQWEEPQTICTPTHKSEADFVTSEPNQREDS
TGAAAQKAAPLFWDIKWSS
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttgatgtgcctccatctgtgctgctgttcagcctctgcctcctcttcctgccg
tcactcgctacacttcaccacgagtcagatgattcaaaacttctccaggtaaccatcccc
ataaacccgcctgtgattgctgtgctggggggctctttgactttaccctgcctggtgtcg
ctggccctccctcctccgtccccctccaccaacggccgtcacgccgtgctgactgtgcct
cgggtcaaatggagcgtcctgactgaagatcgggagacagaaatcctggtggcccgcggc
gaccgggtcagagtcagcgaggcctacaaagaccgagcgtcgctgctcaattacgcctac
tcccctgcagacctgacgctgcgcctgcagaacctgaggcagaacgataccgggttctac
cgctgtgaggtccagcagggcctggaggatgccgacgatgtggctcaggtcaaggtcaaa
ggagtggtgttccattatcgcgacgcttccagccgatatgctttcacctttgagcaggcc
aggaaggcctgcgaggagatcggggctgaaatagcctccccagagcagctgcttgcagcc
tatcatagtggatatgagcagtgtgacgcaggctggctctcagaccagtctgtcagatat
cccattcagatgccaagagagggctgttttggaaacatggacggcacgccgggtgtaagg
aactacgggctgctggaacttgatgagctctatgacgtctactgctacgtggagaatatt
catggtgaggtgttccatggctccgccccccagcgttttaccttcggggaggccaaggcg
tattgtgtgagtcacggtgcggagctggcctccacagctcagctctacgcagcctggagc
gatggactgaaccactgcagcccaggctggctggctgacgggagcgtacgctaccccatc
gtcatccccagagagcgctgtggaggtggcgaacctggcgttaaaaccatctacagatac
agcaaccagacaggcttcccagatgttcactctcaacacgacgtctactgctttaatagt
gattacagcccttacaccgagtctccccagggttttctcgccactgagccagaggacatt
gggcaagacattattttcctaaccactcaacaggacgtcagtctgagcgagacgatgtca
aaagagacggaagagatgaataacgctccaacatatgatccgacaaagcagcacaacgag
gcagcggtaaaagaaaaccctccccagtttgtcgctccctcgtctaagcctcgggagaac
ccctccaccaaagatacaggggagctggtaaaggtcagccaccccgactcctttcagctg
gcgcctgaagaagacccacacacagatcgtgaagttcctccaacttctccatcgtttgat
ggtctctctgtggataacgaaacttttctcacaacagacggaacaacgtttgaaagcacg
ccgcccacagaggagcacatttctgaagctaaaagcccagactggttggtttatagtccc
acgtctgaagctgatctggacgaagagcatcatgaggggagcgaccttcctgtttcacaa
gaagaccacacgactgacgtcgcctcggatcatccttctgttaccgagtctgctgtttta
ggaaagttagaagaagtcaccactgactctgttgttgagagttcccctcacaccgaggaa
ggtggcgctcgctccaccaccccgctgccttcaatcactaacagcacgtatgaagatcag
tcagtagagtctgaagaggagaccagagacctcacagatgataatctgatggatttgaac
atctcttccatcgctgaagaagtccctgcttctaactcgagtttcgaccccattcatgag
tctgctgttatggtaaatcacgacgacgacgacgatgatgaggaggagttcaaacacact
tcagatggtccgacagagcagagtggatatgcggatcctgtagaaatcccaagagcagaa
gtcgtccagctcacagctgaaataaactccagcactgatgcttctgttttaataaagaag
ctgttttcatcgccggtctctgtaactgtgtctccatcgtctgtggaggttgaagccagc
tcttcagaggccgtaacgttccagcatgaaagtgatttttcatctgacgctgaaccccag
gaggagactcgggatgaaactgaccaggaggatttagaagaaagcccatcagtccagaac
ttcacagacgatggttcaggcgagggagaaagagaggaggcgcatgaatcttcgtgggaa
acgccccaaagaaaatcggagctttttctgacaaacccgactctgtccgcagaccacacc
tctgagggaattattgacgaggctgggactaacgcaccgccacagtcaaagacaaaaatc
acgctggttcctcatcagagcttcacccccagctgggagccggagccttcgacccaaaca
cccgaggagtctctgtcggatcgggaatacagcgctgagcttcctgtccacgaggagtct
gacgagatctcccaggagcagagattcaccacagcagcaagcaaagcccgcgcagaacct
gtaacagagggccacgaagcagaccccaccaccgatgagccctcaggtaacatctgcaca
tggcttcctgaggaggaggaggcgtccaggtcagccttcaccaccaacagtgacgtgacc
atcactgcccccaccgtccaccctgagcattttggggacgttgtcagggagcatacggcc
atggggccctccctgcctgctgagaaggtttctgccacaagccaaggagactcttgcctg
gacaatccttgtcttaatggaggcacttgtgttgacggtgaatctttacggtgcttttgt
ttacctggttatggaggacacttctgtcaaacagatatggaggagtgtgagcccggctgg
gacaagtttcagggcttttgttatcatcacttcagcagacggcagagctgggaggcggcg
gagcagcactgtcggctgtgtggaggacatttactctccgtcatgactcccgaggagcag
gactacgtcaatgataaatacagagaatatcagtggattggactaaatgacagaaccatt
gaaggagacttccgctggtctgatggaaaccctctgctttacgagaactggtacaaaggt
cagcctgacagctacttcctgtccggtgaggactgtgcagtgatggtttggcacgatggt
ggccgatggagcgacgtgccatgcaactaccacctgtcgtacacctgcaagaagggcgcc
tcctcctgtggggacccccctcgggttccccacgctcaggtgtacgggaagaagcggttg
cgttatgagaccaacagcagggtgcggtactactgcaaggaaggctttgtgcagaaactg
aatcctgttattacatgtttgcctggtggtcagtgggaggagcctcagactatctgcacg
ccaactcataagtcagaggcagactttgttacctcagagcctaaccagcgtgaagacagc
acgggcgcagctgcacagaaagcagctccgctcttctgggacattaagtggagttcttaa
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