Nematolebias whitei (Rio pearlfish): 119409992
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Entry
119409992 CDS
T08042
Symbol
tmc4
Name
(RefSeq) transmembrane channel-like protein 7
KO
K21988
transmembrane channel-like protein
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nwh02000
]
119409992 (tmc4)
03037 Cilium and associated proteins [BR:
nwh03037
]
119409992 (tmc4)
Transporters [BR:
nwh02000
]
Other transporters
Pores ion channels [TC:
1
]
119409992 (tmc4)
Cilium and associated proteins [BR:
nwh03037
]
Other cilia and associated proteins
Stereociliary proteins
119409992 (tmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Bap31_Bap29_C
Motif
Other DBs
NCBI-GeneID:
119409992
NCBI-ProteinID:
XP_037532823
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All DBs
Position
5:16313844..16320699
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AA seq
610 aa
AA seq
DB search
MHAPVSSSADSWKRNKSLRKLKNNIREFLYFFSLWRKSLQKIGGNFGGGVESYFLFLRFL
VVLNFVSFLLIAGFVIIPSFVFRSAGTSVVNSTGDEAFYEGQCMKYDPNPQGLVVFYEYF
LHLLSGKGFMEDSFMFYGYYYSNNNTMENRSLFYNIPLAYLFTAVFYFAFCLCCIIARMG
ATVRVAVATGGSTISNYSMIVFTGWDYGCLGNQATKLKQRNIYYQLQVDLEEERIKKQAA
SLTPWKKVALYSLRVLMFFISFGLIVAAFFGIFVATEFSQSNSDKPGILGLVIEYLPSIV
ITAGNFLVPLLCDQIASIEKYSPSITVVVALLRAVVLRLMSLGVLLFTLWSQITCNGNTE
EGECETCQYNYDKYQCWETSVGQEMYKLTLFDLLVNIALLVLVEFPRRMVVDNWSSKLSQ
LVGRQEFVVPSNVLGLVYGQTVVWTGALFCPLLPLINTIKFVILFYCKKITLFYNCRPAL
KTFRSTTSAFFFLVVLLFGWMLSLVVMIYSLAEIRPSMACGPFRFFPTMWQIVPNSFYSL
SKVTQEFLFFIGSQAFSIPLFALSCVVMFYFIALSSIYKKSVAMLKAQLKLAGQDKQFLV
KQIEKLNNNI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcgcctgtttcctccagcgctgattcttggaaacgcaacaaatctctgcgtaaa
ctcaaaaacaacatcagagagtttctttactttttctcactgtggaggaaatccctgcaa
aagatcggagggaactttggaggcggtgttgagtcatacttcctctttctccgattcctg
gttgttcttaattttgtttccttcttactgattgccgggtttgtcatcatccccagcttc
gtcttcagatctgcagggaccagcgttgtgaacagcacgggtgacgaagcattttatgaa
ggacaatgtatgaagtatgacccaaaccctcaaggcctggtggtcttctatgagtatttt
cttcacttactttcaggaaagggttttatggaggattcattcatgttttatggctactac
tacagcaacaacaatacaatggagaacaggagccttttctacaacatccctctggcctac
ctcttcactgctgtcttctactttgctttttgtctctgttgcatcatagcacgcatgggc
gctacagttcgagttgccgtggcaacgggaggcagcaccataagcaactacagcatgatt
gtgttcacaggatgggactatggttgcctgggaaaccaggctaccaaactgaagcagaga
aacatctactaccagctacaggtggatttggaggaagagcgcataaagaaacaagcagct
tctcttacaccgtggaaaaaagtagctttatactctctgcgcgttttaatgttttttatt
tcatttgggctcatcgtagcagccttttttggcatctttgttgccacggagttcagtcag
agtaacagtgataagcctgggattctaggtttggttatagagtatctgccatctattgtc
atcaccgcgggaaacttcctggtgcctctgctgtgtgaccaaatcgcctcgatagaaaaa
tattctcccagcattactgtggtggtggcacttttaagggcagtggtcctgcgtctgatg
agtttaggcgtcctcctcttcacgctgtggagtcagatcacctgcaacgggaacacagaa
gagggcgagtgtgaaacgtgtcagtacaactatgacaaataccagtgctgggaaacgagt
gtgggacaggagatgtacaagctgacgctttttgacctcctcgttaacatcgctctgctc
gtgttggttgaatttccacgcaggatggtggtggacaactggtccagtaagctgtctcag
ctggtgggccggcaggagtttgtggttccctctaacgttcttggactggtttatggtcag
actgtggtctggacaggagctcttttttgccctctgctgccgcttatcaacaccattaag
tttgttatcctcttttactgcaaaaagatcacactattctacaactgccggccagctctg
aagacgtttcggtccaccacctccgctttctttttcctggtggtgctcctgtttggctgg
atgttgtccctggttgtcatgatttatagtcttgcagagatccgaccatcaatggcctgc
gggcctttccgtttcttccccaccatgtggcagattgttcccaactcgttctatagtctc
tctaaggtcacacaggagtttctcttcttcattggctcacaggcattctccatacctctt
tttgcattatcatgtgtggttatgttttacttcatcgctttatcctccatctataaaaaa
agtgtagcgatgctaaaggctcagctaaaattggcaggccaagataagcagtttttggtg
aagcagattgagaagctgaacaacaacatctga
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