Nematolebias whitei (Rio pearlfish): 119410009
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Entry
119410009 CDS
T08042
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119410009 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nwh03041
]
119410009 (prpf3)
Spliceosome [BR:
nwh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
119410009 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
DUF2729
Motif
Other DBs
NCBI-GeneID:
119410009
NCBI-ProteinID:
XP_037532841
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All DBs
Position
5:complement(16980226..16995593)
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AA seq
694 aa
AA seq
DB search
MSLPKREVEELRPWVERTVKKVLGFSEPTVVTATLHCVGKGLDKRKTTDQLRPFLDDSAV
GFVERLFEALEESRNSRGNKGAGEKNRKKELKDVFGEEVDSSALKETPKAVDGTAVKRKR
VPRFEEVEEPEVIPGIPSDSPGMLTKMQIKQMMEAATKQIEERKKQLSFTPSSTTATVDA
ATVTRLTSGGASSIAPSQAASFMNDAIEKARKAAELQARIQSQLAMKPGILGTLGNTGPQ
NFVALANLHAMGIAPLKVEIKEVNKPTPLILDEKGRTVDATGKEIELTHRMPTLKANIRA
VKREQFRQQLKEKPGEEIESTSYFDLRVPMAPAQRSRKSFKFHDPGRFEKIAQRVRTKAQ
LERLQNEIAQAAKKTGIQASTKLALIAPKKEIEEGDVPSIEWWDSFILPYNIAVNPETKF
EEFELFGVTNLVEHPAQMSPPVDSDKPVTLGVYLTKKEQKKLRRQTRREGQKEVQEKVRL
GLMPPPEPKVRISNLMRVLGTEAVQDPTKVENFVRDRMFKRQKIHEEANAARKLTAEQRK
EKKVKKLKEDLTNGVHIAVYRIRYLQNPAKKFKVEANANQLYLTGTVVLHKDVNLVVVEG
GPKSQKKFKKLMMHRVKWQEHNSKRDDPDGDDDAKRNNKCWLIWEGTAKERSFGEMKFKQ
CPTESMAREHFKKHSTEHYWDLALSHSVLDGTDD
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcctaagcgggaggtggaggagttgagaccctgggtggagcggactgtgaag
aaggtgttgggtttctctgagcccactgtggtcactgcaactttacactgcgtgggaaag
gggctggataaaaggaagaccacagaccagttgcgtcctttcctcgatgattccgcagta
ggttttgtggagcggctttttgaggctctggaggagagccgcaattcccgtggtaacaaa
ggagcaggcgaaaagaaccgcaagaaagaactaaaggatgtctttggagaggaggtcgac
tcaagtgccctgaaagaaactcccaaggcggtagatgggacagctgtaaagcgaaagcga
gtccctcgttttgaggaggttgaggagcctgaggtcatacctggaattccatctgacagc
ccaggcatgctcaccaaaatgcagatcaaacagatgatggaagcagccacaaaacagatt
gaagaaagaaagaaacagctgagctttacaccttcatccaccactgcaacagtggatgct
gcgacagtcactcggctcactagtggtggagcctcatctatcgccccctcccaggctgcc
agctttatgaacgatgccatcgagaaggcccgcaaggcagctgagctacaggcccgcatc
cagtcccagttagctatgaagccaggaatccttgggactttggggaacactgggcctcaa
aactttgttgcactcgctaatctacacgcaatgggaattgctcctctgaaagtagaaatt
aaggaggtgaacaagccgacgcctcttattttggatgagaagggcagaaccgttgatgct
accggcaaagagattgaactcacgcatcgtatgccaacgctcaaagctaacatacgagct
gtaaagagggagcagttccgtcagcagctgaaggagaagcccggggaggaaatagagtcc
acgtcctactttgacctgcgggtacctatggcaccagctcagcgttctcgcaaaagtttc
aaattccacgatccaggacgttttgagaagatcgctcaaagagttagaacaaaggcccag
ctggaaaggctgcagaatgagatcgcccaggctgcgaagaaaacaggaatccaggcttct
accaaactggcactgattgctcccaaaaaagagattgaagaaggagatgtgcccagtatc
gagtggtgggactctttcatcttgccctataatatagcagtaaatccagaaacaaaattt
gaagagtttgaattgtttggcgtaaccaaccttgtggaacatccggcccaaatgagtcct
ccagtggacagtgataagccggtaacgctgggtgtgtacttaacaaaaaaagaacagaag
aaactaagaagacaaacgcggagagaggggcaaaaagaagtgcaggagaaggtccgtttg
ggactgatgcctccaccagaacccaaagtacgtatctccaacctcatgagagtcttgggg
acagaggcggtccaggaccccacgaaagtcgagaactttgtgagagatcggatgttcaaa
agacaaaaaatccatgaggaggccaacgcagctcggaagctcacagcagagcagaggaaa
gagaagaaggtcaagaagttaaaagaagacctgactaatggtgttcacatcgcagtttac
aggatccggtatttgcaaaatcctgccaagaagtttaaagttgaagccaatgcaaaccag
ctgtacctaacgggaacagttgttctgcacaaagacgtcaatcttgttgtggtggaaggg
ggccctaaatcccagaaaaagtttaagaagctgatgatgcacagagtcaagtggcaggaa
cacaattctaaaagagatgatccagatggtgacgacgatgcaaagaggaacaacaagtgt
tggttgatttgggagggaacggcaaaggagcgtagttttggagagatgaagttcaagcag
tgccccactgagagcatggcccgagaacacttcaagaagcacagcacggagcactactgg
gacctggcgctcagccacagtgtgttggatggcacagacgactga
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