Nematolebias whitei (Rio pearlfish): 119410023
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Entry
119410023 CDS
T08042
Symbol
snx27b
Name
(RefSeq) sorting nexin-27b
KO
K17936
sorting nexin-27
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119410023 (snx27b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
119410023 (snx27b)
Membrane trafficking [BR:
nwh04131
]
Protein recycling
Others
Others
119410023 (snx27b)
Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
119410023 (snx27b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
VirE3
PDZ_2
USP7_C2
SNX17_FERM_C
SNX17-31_F2_FERM
Dickkopf_N
RA_3
Motif
Other DBs
NCBI-GeneID:
119410023
NCBI-ProteinID:
XP_037532854
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All DBs
Position
5:complement(17521338..17539255)
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AA seq
569 aa
AA seq
DB search
MADVTGQGNGSSVPPLPRPSSRNGSGSGSVTPDTGGSCWQTPTTVTSGPRLVRIVKSDSG
YGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGA
THKQVVDLIRAGEKELVLAVLSVPPQEADCLDPGDDGSALSCYDYSDKQAVPISIPSYKH
TELNNEKFVVYNVYMAGRQLCSKRYREFVILHQNLKREFANFTFPKLPGKWPFSLSEQQL
DARRRGLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIAMPDKTTLTVRVR
KNSTTDQVYQAVVMKLGMDSVTASYFALFEVINHTFVRKLAPNEFPHKLYVQNYTSAIPG
TCLTLHKWLFTTDEEILLSDNQLAVSYFFHQALDDVKKGFIKVEEKSYQLQKLAELKKMS
MYLSLLRSCNGYNEIIFPHCSCDSRRKGHVITAISIQNFKLHACTEEGTLESQVILFDWG
EMQRWDTDEEGMAFCFEYVRGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEAI
DKDNKNCSKDGMCGKNIFQLLRHRRDGGT
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgttacgggacaaggaaacggttcctcggtccccccgctgcctcgcccttcc
tcccgtaacggctccgggagcggcagcgttactccagacaccggcggcagctgctggcag
acgccaaccaccgttacttcaggcccgaggctagttcgcatcgtgaagtccgactcgggc
tacggcttcaacgttcggggacaagttagcgaagggggacagctgcggagcatcaacggg
gagctgtacgccccgctgcagcacgttagcgccgttcttcccgggggagctgcggacaga
gctggcatctccaagggggacagaatcctcgaggtcaacggtgtaaacgtagagggagcc
acacacaaacaggtggtggatctgatccgggctggtgagaaagagctggtgctggccgtg
ctgtccgtcccgccgcaggaggccgactgcctggatcctggcgacgatggatcagccctc
tcctgttacgactactctgacaagcaggccgtccccatctccattcccagctacaaacac
accgagctcaacaatgaaaagtttgtggtttacaacgtgtatatggcaggcaggcagctg
tgctccaagcgttaccgggagtttgtgattctgcatcaaaacctaaagagagaatttgct
aattttacgttccccaagctgcctgggaagtggccgttttcgctgtcggagcagcagctg
gatgcacggcgccgaggcttggaggagtacctggagaaagtgtgctctgtacgggttatc
ggagagagtgacatcatgcaggagttcctatctgaatcagacgagaactataacggcgtg
tcagatgtggagctgagaatagccatgcctgataaaacgacgctcaccgtccgagttcgc
aaaaactcaactacagaccaggtttatcaggctgtggttatgaaactaggcatggacagt
gtaacagccagctactttgctctgtttgaggtcatcaaccacacctttgtgcgtaaactc
gcccccaatgagttcccccacaaactgtatgtacaaaactatacctcagccatcccagga
acctgccttactctgcacaagtggctcttcaccacagacgaagagattctgctcagtgac
aaccagcttgctgtcagctacttctttcaccaggctcttgatgatgtgaaaaaaggcttc
atcaaagttgaggagaagtcttatcagctgcagaagctggcagagctgaagaagatgtcc
atgtacctgagtttgttgagaagttgcaacggctacaatgagatcatcttccctcactgt
tcctgcgactccaggcgtaaaggccacgtgatcacagccatcagtatacaaaacttcaag
ctgcacgcctgcacagaggaaggcacgcttgagagtcaggtgatcctgttcgactggggg
gagatgcagaggtgggacacagacgaagagggcatggctttctgctttgagtatgtacga
ggcgagaagaaaccccgctgggtgaagatttttactccttattttaactacatgcacgaa
tgcttcgagagagtcttctgtgagctgaagtggaggaaagaggtggaagaggaggcgata
gataaggacaataagaactgcagtaaagatggtatgtgtggaaagaatattttccagctg
cttcgccacagaagagacggagggacgtaa
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