Nematolebias whitei (Rio pearlfish): 119410054
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Entry
119410054 CDS
T08042
Symbol
nbn
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03440
Homologous recombination
nwh04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119410054 (nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
119410054 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nwh03032
]
119410054 (nbn)
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119410054 (nbn)
DNA replication proteins [BR:
nwh03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
119410054 (nbn)
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
119410054 (nbn)
BRCA1-C complex
119410054 (nbn)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
119410054
NCBI-ProteinID:
XP_037532886
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All DBs
Position
5:18437843..18453720
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AA seq
846 aa
AA seq
DB search
MLLLILNEQTTKGRKMWILTPQELGGETHYLLPGKEYTVGRKSCDILLPNDQSISRIHAH
LTATDQTLTLKDSSKYGTSVNNQRITAPINLTSGEDVTFGVFHSKFTVLHQKPVVCSSCL
DNAGKASLTRALFALGGKLVNTWTQDCTHLAMPTVKVTIKTISALLCGCPIVKPVFFSEL
NNAIQQKLPPPKAESFLPELDEPSLNKEDVNLGTIPARKQLFTRKTFIFLIAKQLKRLSA
AVSFGGGSSQLLEEGSLPLHLLESPNSCVVDVTTGRSQTLLPPSSTEWMNSVRSILQRKG
LRVITESEIGLAAIHASCDKFCNPSCRMDSDSEPKIRPRIPSASLSQSVAVDETVLPAAS
QNVTAYAVNTETTQRMEVSEETGLVAVGETPEKKQNQDTAQFSGSRLTAHTTSVVADTVS
SSLNAADNRDSQRNKPDSKVSGGGRADVSAQKSASKSGGGIRKFDKHSPQNPKPSVQTSP
QKQTTLTNFFQSVNKKRPLDDDLSAVMSEPKRAVPESFITTQDLNTSSVPKQMPSLTLRS
PPAVSETPLDSPADLFQSEVRPEKPQSRKRKEVEEDIQMEELESIMSMDIDGFDDILPSN
QSQQEQVKVHSLAKPNLGTVESSSKRQRISQRENGTSRQNPEVDLKNKSNFQQDTKEQSE
QRKVSVKTEPLQVTENLRNKHESSKPGTSKNTKPFEDEASFIEDEELLQVPIDIHPEDET
EVSVKPVVIKQEVQESKIDEDLPKKLVLVEFRSLTATSPPKTKPKQIQQNGHGRNFKCFH
KKRVPGADGFPHIIGRANLLVHNRGKNSDLDEWLKEAAEEEHENRRDEAIGDDLFRYNPT
KLTKRR
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgcttatactcaatgaacaaacgacgaaaggccgaaaaatgtggatactgaca
ccacaggagcttggaggggagacccactatcttctccccggtaaagagtacacagtggga
cgcaagagttgtgacattcttctccccaacgaccagtccattagcagaattcatgctcac
ctcaccgctacagaccagaccctgacactaaaagactcctccaaatacggcacgtctgtc
aacaaccagagaataacggcgccgattaatctgacatcaggggaggacgttacatttggg
gtttttcacagcaaattcactgtgttgcatcagaagccagttgtgtgttcatcatgtttg
gacaatgctgggaaggcgtcgctcactcgggctctgtttgctctgggggggaagttagtg
aacacctggactcaagactgcactcacctggccatgccgacagttaaagttaccattaag
actatttcagcgctgctgtgcggttgccctattgtgaagcccgttttcttctcagagctc
aacaatgccattcagcaaaaattgccgcctcccaaagcagagagcttcctcccagagctc
gatgagcccagcttgaataaagaagatgttaaccttggaacaatcccagctcgcaaacag
cttttcactagaaaaactttcattttcctcattgctaaacagctgaagcgcctgagtgca
gcagtgtctttcggaggtggaagtagccagctgctggaggagggctcccttcctcttcac
ctgcttgagtctccgaacagctgtgtggtcgatgttacaacaggccgctcccaaactctg
cttcctccctcgtccacagagtggatgaactctgtgaggagcatccttcaaagaaaaggc
cttcgagtcatcacagagtctgaaatcggtttggctgccatccatgcatcatgtgacaag
ttctgcaatccgtcctgtcggatggactcggattctgaacccaaaataagacccaggatc
ccaagtgcgtcgctgtcgcagagcgtggctgtggatgaaactgtgttacctgcagcatct
cagaacgttacagcgtatgcagtcaacacagagacaacacaaaggatggaggtttctgag
gagactggtttggtagctgtaggagagactcctgagaagaagcaaaaccaggacacagct
cagttcagtggatccagactcacagctcacacaactagtgtggtggctgacacagtgagc
tcatcattaaacgctgcagacaacagagactcacagaggaacaaacctgactctaaagta
tcaggtggaggccgtgctgatgttagtgcccagaaatctgcttcaaagtccggtggtggc
atccgaaaatttgacaaacactctcctcagaatccaaaaccgtctgtgcagacttcccca
cagaaacagacaactctgaccaatttctttcagtctgtcaacaagaaaagacctttggac
gatgatctctcagcggtgatgtctgagccaaagcgagctgtaccagagtcattcatcact
acgcaggatttaaacacctcatcagtccctaaacaaatgccctcactcactctcaggagc
cctccagctgtgtctgagactcctctcgactcgcctgctgatttgtttcagtcagaagtt
cgtccggagaaaccacagagtcgcaaaaggaaggaggtggaagaagacatacagatggag
gaactggagtccattatgtccatggatatagatggctttgacgacattctgcccagtaat
caaagccagcaggagcaggtaaaggtgcactctttggctaaaccgaaccttggtactgtt
gagtcttcaagcaagaggcagcggatcagtcagagagaaaatggaacaagcagacaaaac
cccgaagtggacctgaaaaacaaatcaaacttccaacaggacacgaaggaacagtctgag
cagcgtaaagtgtcagttaaaaccgagccccttcaggtaacagaaaacctgagaaataaa
cacgagtctagtaaaccaggaacgagtaaaaacacaaagccgtttgaagacgaagcatct
tttattgaggatgaagaactcctccaggtaccgatagatattcatccagaagatgagacc
gaagtatctgtcaaacctgttgtgatcaagcaggaggttcaagagtcaaagattgatgaa
gacctgccgaagaagctggtgttggtggagtttagatctctcacagccacttctcctcca
aaaaccaaacccaaacagattcagcagaacggacatggaaggaacttcaaatgtttccac
aagaaacgtgttccaggtgcagatggtttcccacacatcatcggcagagctaatcttctg
gtccacaacaggggcaaaaactctgatctggacgagtggctgaaagaagcagctgaggag
gagcatgagaacagacgggacgaggccataggagacgacttgttcaggtacaacccaacc
aaactaaccaagagaagatga
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