Nematolebias whitei (Rio pearlfish): 119410097
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Entry
119410097 CDS
T08042
Symbol
gsdmeb
Name
(RefSeq) gasdermin Eb
KO
K22146
gasdermin-E
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
119410097 (gsdmeb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nwh02000
]
119410097 (gsdmeb)
Transporters [BR:
nwh02000
]
Other transporters
Pores ion channels [TC:
1
]
119410097 (gsdmeb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Motif
Other DBs
NCBI-GeneID:
119410097
NCBI-ProteinID:
XP_037532929
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All DBs
Position
5:complement(21018137..21022456)
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AA seq
467 aa
AA seq
DB search
MFAIATKNFVENVDSGGFLISVSSLNDDINLLTVVVKRKRFWFWQKPKYLPADFILSDIL
TGDTPLEPVVVEKDFLKYQGTFGDSIQGTVDASFIKTSVSLEGKDTTKLQSSFGSLKKEE
VDVQKLLHDCKDRVLDMSHSLIQQTKEKHRQVFGIVKERIVTTQPCSVIEEVQQGGQCGG
TLSSCGPKTSKISLKENGSLNIDSNITMEIPINSTIAYGLLELEVRQNGHFELCLMSDTN
GGFEDVDSPLEKTELLGVSGAPVKHTLQQELEQLKDHFQLLSALPASTRSSLLQQISKHM
QDPAAIGALQIVLDQMYLGKKPGLGDIGLTESQQQKIQETLSLLEHSGQAESIQTTPFLT
ALHLIISALDEMTEDCLAVVRSCSLPPTLQTLERLVQCVSGAGEMPLSSVDLTQDLYEMT
EHLFASFNVHLKRDSDVVRTEIGHQPGSRPLVLCVAIRGLASLAPTC
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccatagctactaaaaacttcgtggagaatgtggacagtggaggctttctgatc
tcagtgtccagcctgaatgatgatattaatcttctgactgtggtggtgaaacggaaacgt
ttctggttctggcagaagcccaagtatctcccagctgattttatcctcagtgacatactg
acaggagacacacctttagagccagttgtggtggaaaaagacttcctcaaataccaaggg
acgtttggtgacagcattcagggaactgtggatgccagttttataaaaaccagtgtcagc
ctggagggtaaggacaccaccaaacttcagtcatcctttggcagtttgaaaaaagaggaa
gtggacgtgcagaagctgctgcacgactgcaaagacagagttctggacatgtctcattct
ctaatccagcagacgaaagagaagcacaggcaggtgtttgggattgtgaaggagcgtatc
gtgaccactcagccgtgttcggtcatagaggaggtgcagcagggggggcagtgtggaggg
actttgagctcctgtggtccaaagacctccaagatttcactgaaggaaaatggaagcttg
aatatagacagcaacattacaatggagattcctatcaactctacaatagcctatggcctc
ctagagctagaggtcagacagaacggacactttgagctgtgtctgatgtcggacaccaac
ggaggttttgaggacgtggacagccctttggagaagacagaactgctgggtgtctcaggt
gctcctgtgaaacatacacttcaacaagagctggagcaactaaaggaccatttccagctg
ctttcagctcttcctgcatccaccaggtcctctctgcttcagcaaatctccaaacatatg
caggaccctgcagccatcggtgctcttcagattgttctggaccagatgtatctgggtaag
aaacctggcctgggtgatattggactgacggagtctcaacaacagaaaattcaagaaact
ctcagtctgctggagcattctggtcaagcggagtcgattcagacaacaccattcctcaca
gcactgcatctcattatcagtgccctggatgaaatgacagaggattgtcttgctgtcgtg
agaagctgcagcctccctccaaccttacaaaccctggagcgactggtgcagtgtgtgtca
ggagctggagagatgcctttgagcagcgttgatctgacacaagacctttatgaaatgact
gaacatctgtttgcatcctttaacgtgcacctaaagagagacagcgacgtggtgcgaaca
gaaattgggcaccagccaggaagtcgacctctggttctatgtgtcgctatcagaggtctc
gcctcactggcccccacttgttaa
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