Nematolebias whitei (Rio pearlfish): 119410104
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Entry
119410104 CDS
T08042
Name
(RefSeq) ATP-binding cassette sub-family E member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nwh03009
]
119410104
Ribosome biogenesis [BR:
nwh03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
119410104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
AAA_21
SMC_N
Fer4
Fer4_6
AAA_22
AAA
AAA_15
AAA_29
AAA_16
RsgA_GTPase
Fer4_2
Fer4_10
NACHT
nSTAND3
AAA_23
Rad17
TsaE
Fer4_4
Fer4_21
ORC-CDC6-like
AAA_30
Fer4_16
Fer4_7
SRP54
Fer4_3
AAA_7
AAA_19
Motif
Other DBs
NCBI-GeneID:
119410104
NCBI-ProteinID:
XP_037532942
LinkDB
All DBs
Position
1:complement(41339366..41349841)
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AA seq
599 aa
AA seq
DB search
MADKNTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTSQSKIVWISESLCIGCGI
CIKKCPFGALSIVNLPSNLEKETTHRYCANSFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKYDNPPDWQEILTYFRGSELQNYFTKILEDDLRAIVKPQYVDQIPKTV
KGSVGAILSRKDDMDTQNIVCDQLDLTHLRERNVEDLSGGELQRFACAVVCIQKADIFMF
DEPSSYLDVKQRLKAAITIRSLITPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFSVREGINIFLDGYVPTENLRFRETSLVFKVAETANEEEVKRLRHYQYPDMEKTMGEF
SLGIKGGEFTDSEIMVMLGENGTGKTTFIRMLAGGLKPDGGGEVPILNVSYKPQTISPKF
KGSVRALLHEKIRDAYTHPQFITDVMKPLQIESIIDQDVQNLSGGELQRVALTLCLGKPA
DVYLIDEPSAYLDSEQRLMAARVIKRYILHAKKTAFVVEHDFIMATYLADRVIVFDGIPS
TKTFANRPQSLLAGMNRFLSLLEITFRRDPNNFRPRINKLNSIKDTEQKKSGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaaaacaccaggatcgccatcgtcaaccacgacaagtgcaaacctaaaaaa
tgccgtcaggagtgcaagaagagctgcccggtggtccgcatgggtaaactgtgcatcgag
gtgacgtctcagagtaagatcgtctggatctcagagtctctgtgtatcggctgcggcatc
tgcatcaagaaatgtccgtttggagcgttgtccatcgtgaaccttcccagcaacctggag
aaagaaacgacccacagatattgtgccaactccttcaaactgcacaggctgcctattccc
aggcccggggaggttctgggtctggtggggaccaacggtatcgggaagtccacggctctg
aagatcctggctggaaaacagaaacccaacctggggaaatacgacaatcctcccgactgg
caggagatcctgacctacttcagaggttctgagctgcagaactacttcaccaaaatcctg
gaggacgacctgcgggccatcgtcaagccccagtacgtggaccagatccccaaaaccgtg
aagggctcggtgggggccatcctgagcaggaaggacgacatggacactcagaacatcgtc
tgcgatcagctcgatctgactcacctgcgggagaggaacgtggaggatctgtccgggggg
gagctgcagaggttcgcctgcgccgtcgtctgcatccagaaggccgacattttcatgttc
gacgagccgtccagctacctggacgtcaaacagcgtctgaaggccgccatcaccatccgc
tcgctcatcacgccggacagatacatcatcgtggtggagcacgacctgagcgtgctggac
tacctgtcagacttcatctgctgcctgtacggagtcccgagcgcctacggagtcgtcacc
atgcccttcagcgtccgagaaggcatcaacatcttcctggacggttacgttcccacagag
aatctccggttccgtgaaacctcgctggtctttaaggtggcagaaacggccaatgaggag
gaggtgaagaggctcaggcattaccagtacccggacatggagaagacgatgggcgagttt
tctctgggaatcaaaggaggagagttcacggactcggagatcatggtgatgctgggggag
aacgggacggggaagaccaccttcatcagaatgttggccggagggctcaaacccgacgga
ggaggtgaagttcccatcctgaacgtcagctacaaacctcagaccatcagccccaagttt
aagggcagcgtccgagctctgctccacgagaagatccgggacgcctacactcacccccag
ttcatcaccgacgtgatgaagccactgcagatcgagagcatcatcgaccaggacgtccag
aacctgtccggtggtgagctgcagagagtcgccctcactctgtgtctggggaaaccggcc
gacgtttacctgatcgacgagccgtcggcgtacctggactctgagcagaggttgatggct
gccagagtcatcaagaggtacatccttcacgctaagaagactgcgtttgtggtggagcac
gacttcatcatggcgacgtacctggccgacagggtcatcgtgttcgacggcattccctcc
acgaagacctttgcgaacaggcctcagagtctgctggctgggatgaaccgcttcctgtcg
ctgctggagatcacgttcaggagagacccaaacaacttcagacccagaatcaacaaactc
aactccataaaggacacggaacagaagaagagcgggaactatttcttcctggacgattaa
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