Nematolebias whitei (Rio pearlfish): 119410148
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Entry
119410148 CDS
T08042
Symbol
wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119410148 (wdtc1)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119410148 (wdtc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_RFWD3
TPR_19
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
TPR_2
TPR_1
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_HPS5
ANAPC3
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_WDR35_TULP_N
TPR_17
Beta-prop_WDR19_1st
TPR_16
TPR_6
TPR_9
Barstar
TPR_11
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
119410148
NCBI-ProteinID:
XP_037532984
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All DBs
Position
5:complement(24807909..24825645)
Genome browser
AA seq
670 aa
AA seq
DB search
MSAANITAEILHRQIRDKRASGFQRFYHVTDPFIKRLGLEAELQGHTGCVNCLEWNERGD
LLASGSDDQHAIIWDPFRHKKLTTMHTGHAANIFSVKFLPHSGDRILITGAADTKVHVHD
LTMKETIHMFSDHTNRVKRIATAPMWPNTFWSAAEDGIIRQYDLRENSKHSEVLIDLTEF
CGQLAEAKCLAVNPQDNNYMAVGANGPFVRLYDIRMIHNYRKSVSQSTSAAVHTFCERQR
PIPDGAGQYYVAGHLPVKLRDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYLFDLTFK
QRPYTFLLPKKCQSSAEDVQNGKTTNGVSNGILLPASHIHVAGSKMHASSLELPPHLEEI
KQQANDAFARQQWTQAIQLYSLSIHQASSNAMLYGNRAAAYMKRKWDGDHYDALRDCMKA
LTLNPGHLKAHFRLARCLFELKYVTEALECLDDFKGKFPEQAHSSACDALDKDIKAALFN
KSEAAEDKKSNSSVRFHSFSRKESIPEDETVLRERSFDYKHRYCGHCNTTTDIKEANFFG
SKGQYIVSGSDDGSFFIWEKETTNLVRILQGDESIVNCLQPHPSYCFLATSGIDPVVRLW
SPRPETDSENGRVVEDMEGAAQANQRRMNADPLEVMLLNMGYRITGLRGVGPDGSDDEDS
SEGQVQCRPS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgccaacatcaccgcagaaatcctgcacaggcagatcagggacaagagagca
tcaggcttccaacggttttaccatgtgaccgatccctttatcaagagacttggactggag
gccgagctgcaggggcatactggctgtgtgaactgtctggaatggaatgagcgaggagat
ctgctggcttcaggttcagatgatcaacatgctatcatctgggatccattcagacacaaa
aagctcacaactatgcatactggacatgcagctaatatattctctgtaaagttccttcca
cactctggggaccggatcttgattacaggtgcagccgacacaaaggtccatgtccacgac
ctgaccatgaaggaaacgatccacatgttttctgatcataccaacagagttaaacgcatc
gccacagctccaatgtggccgaacaccttctggagtgctgcggaagatggcatcatcaga
caatacgacctgcgggagaacagcaaacactctgaggttctgattgaccttacagagttc
tgtggtcagctggctgaggccaagtgtctagctgtcaaccctcaggataataactacatg
gcagtgggagctaacgggccttttgtccgcctctacgacatcagaatgattcacaactac
aggaagtctgtgagtcagagcacatcagcagctgtgcacacgttctgtgaaaggcagagg
ccaatcccagatggtgctggacagtactatgtagcagggcaccttccggtgaaactcaga
gactacaacaaccgactgagggttctggtggccacttacgttaccttcagcccagatggc
actgagctgctcgttaatatgggtggagagcaggtatacctgtttgatttaacgtttaag
cagaggccatataccttcctccttccaaagaaatgccagtcaagtgcagaagatgtgcag
aatggaaaaacaacaaacggcgtctccaatggaattcttctgcctgccagtcatattcac
gtagctggaagtaaaatgcacgctagttctctcgagcttccccctcacttggaggaaatc
aagcaacaagctaacgatgcatttgctcgccagcagtggactcaagccatccagctgtat
agcttaagcattcatcaggccagcagcaacgccatgctatatgggaaccgtgctgcagcc
tatatgaagcgcaagtgggatggagaccattatgatgccctgagggactgcatgaaggct
ctgacattaaacccgggacatctgaaagcacatttcaggctcgcacggtgtctgttcgag
ctgaagtatgtgaccgaggctctggagtgtctggatgatttcaaagggaagtttccagaa
caagctcacagcagtgcctgcgacgccttggataaagacatcaaggctgctcttttcaac
aaatcagaagctgcagaggataagaaaagcaacagctccgtccgattccactcgttcagt
cggaaagagtccattcccgaggatgagactgtgttgagggagcgcagttttgactacaag
cacagatactgcggccactgcaacaccaccacggacatcaaggaggccaacttcttcggc
agcaaaggtcagtatattgtcagcggctcagacgacggctctttcttcatctgggaaaag
gagacgactaatctggtgcggatcctgcagggcgacgagtcgatcgtaaactgtctgcag
ccccatcccagttactgcttcctggctacaagtggtattgaccctgtggttcgattatgg
agtcccagaccagagacggacagtgagaatggacgtgtcgtggaggacatggagggagct
gctcaggcaaatcagagacgcatgaatgccgaccctctagaggtgatgctgctgaacatg
ggctatcgcatcactggactgcgtggtgtgggtccagatggttcagacgatgaagacagc
tcagagggacaagtacagtgcaggccgagctaa
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