Nematolebias whitei (Rio pearlfish): 119410217
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Entry
119410217 CDS
T08042
Symbol
cnga1b
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
119410217 (cnga1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119410217 (cnga1b)
Ion channels [BR:
nwh04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
119410217 (cnga1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
EMC3_TMCO1
DUF3043
DUF2207_C
Sec62
MDM10
NatA_aux_su
Piezo_TM1-24
CDC45
RNA_polI_A34
NPR3
Tim54
Menin
ALMT
DUF2126
Motif
Other DBs
NCBI-GeneID:
119410217
NCBI-ProteinID:
XP_037533060
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All DBs
Position
1:complement(42257517..42266125)
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AA seq
658 aa
AA seq
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MARVAPSVPTRGPGFNPPTIILQDMEGEEPDDIRDRVRFPQESGPEVLFNVNNNNNNQEE
EETKRKRSNEEETRRKRSDKKQKKEKHRQEKKERKEKQREEKEKKQKEKEEKQKKEEVAR
DITVFDPAGNTYYHWLFIITIPVMYNWTVIIARACFEELQTDYLFWWFFLDFISDVIYLM
DMAFRTRTGYLEQGLLVKDEQNLRERYTNTFQFKLDLVSMIPTDVLYLIVGVTYPEVRLN
KLLRFNRMMEFFQRTETRTNYPNALRISNLVMYIIIIIHWNACLYYSFSKAIGFGADRFV
YPDPADPEFGRLVRKYAYSMYWSTLTLTTIGETPPPVENSEYFFVVTDFLVGVLIFATIV
GNVGSMITNMNAARADFQSRIDAIKQYMSFRKVTKDLEKRVIKWFDFLWTNKKAVDEREV
LKFLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVFSPGDYICKKGDIG
REMYIIKEGKLAVVADDGVTQFVILSEGSYFGEISILAIKGSKAGNRRTANIRSIGYSDL
FCLSKDDLMEALTEYPDAKALLEEKGRQILMKDGLLDLEVAAQGPDPKDMEEKVDRMTGT
LDSLQTQYARLLAEHDATHSKLKHRVTRLERKLAPPPQAPPPSTPDTQTTKEEEMGRK
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggccagagtagcaccgtcagtaccgacccgtgggcccgggttcaacccccccaccatc
atcctgcaggacatggagggggaggagccagatgacatcagagaccgggtcaggtttcct
caggagtctggacctgaggttctcttcaacgtcaacaacaacaacaacaaccaagaggag
gaggaaacgaagaggaagaggagcaatgaggaggaaacgaggaggaagaggagcgacaag
aaacaaaagaaggagaaacacagacaggagaagaaggagaggaaggagaaacagagggag
gagaaggagaagaaacagaaagagaaggaggagaaacagaagaaggaggaggtggcccgg
gacatcacggtgttcgacccagcagggaacacctactatcactggctcttcatcatcacc
atccccgtcatgtacaactggaccgtcatcatagcccgagcctgtttcgaggagctccag
acagactacttgttctggtggttcttcctggacttcatctctgatgtcatctatctcatg
gacatggccttcagaacccggactggttacctggagcaggggttgctggtgaaggatgag
cagaacctacgcgagcgctacacaaacacctttcagttcaaactggacctggtctccatg
atccccactgatgtcctgtacctgatcgttggggtcacgtaccctgaggtccgcctcaac
aaactgctgaggttcaacaggatgatggagttcttccagcggaccgagaccagaactaac
tatcccaatgcccttcgtatctccaacctggtcatgtacatcatcatcatcatccactgg
aacgcctgcctctactactccttctccaaggccattggttttggtgctgaccggttcgtg
taccctgacccggcagatccggagtttggtcgtctggtgaggaagtacgcctacagcatg
tactggtccacgctgacgctcaccaccatcggagaaactccgccccctgtggagaactcc
gagtacttctttgttgtgaccgacttcctggtgggtgtcctgattttcgccaccatcgtc
ggtaacgtcggctcgatgatcaccaacatgaacgctgccagagccgacttccagtctcgc
atcgacgccatcaaacagtacatgagcttcagaaaggtaactaaggacctggagaaacga
gtcatcaagtggtttgacttcctgtggaccaacaagaaggcagtggacgagagggaggtg
ctgaagttcctccctgacaagctgagggctgagatcgccatcaacgtgcacctggacacc
ctgaagaaggtccggatctttgcggactgtgaggccggtctgctggtggagctggtgctg
aagctgcagcctcaggtcttcagtccaggagactacatctgcaagaaaggggacatcggc
agagagatgtacatcattaaggaggggaagctggccgtggtggctgacgatggcgtcacg
cagtttgtcattctcagtgaggggagctacttcggtgagatcagcatcctggccatcaaa
ggcagtaaggcaggaaacaggaggactgccaacatcaggagcatcgggtactcggacctg
ttctgtctgtccaaagacgacctgatggaggcgctgaccgagtatcctgatgctaaagct
ctgctggaggagaaggggaggcagattctgatgaaggatggcctgctggacctggaggtg
gcggcgcagggcccggaccccaaggacatggaggagaaggtggaccggatgaccggcacc
ctggactccctgcagacccagtacgcccggctgctggcagaacacgacgccactcacagc
aaactcaaacaccgagtcaccaggctggagaggaagctggccccgccccctcaggccccg
cccccctcaacacctgacactcaaaccaccaaagaagaagaaatgggaagaaaatga
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