Nematolebias whitei (Rio pearlfish): 119410244
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Entry
119410244 CDS
T08042
Symbol
prdm13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119410244 (prdm13)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
119410244 (prdm13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_7th_ZNF462
zf-C2H2_15
ADK_lid
zf-BED
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
119410244
NCBI-ProteinID:
XP_037533084
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All DBs
Position
5:37718717..37723948
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AA seq
634 aa
AA seq
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MVLISPRAMQATRAPTTSTVSVFADCSIPAGLRIGPVPGLCKLGKYVSDRKETGPKKKIR
LIRGEFVDESGCPVPDWIGFIRAARSSQEQNLEAVSDLPGGQIFYRALREIPAGEELSVW
YSNTLAQWFDIPTTATPTHDEKGDERYICWYCWRIFKYPNTLKAHVHFHCALSNGRGFVS
SEQARGTESFSRSPKSGDISNTSTSPRSSHSNSSGSDSGRRAVSSSPFLNKTRVSKKSSS
EEQDRALDMSVTSVRNQGHLLGLGATSSVLASMEFHPGVRSAFKPTGVSKVLDPSREEAN
GKLSGFGFTKLIGSMKPIRSLGEGLNGGGGHPPKCAPAIIDSTSQMVPCANPIRGFPLLQ
HVEETSAFKHVESRMHSGLSPARYPQMPPGLHFERFSLPHFDGVKSYSGDCNLPLMPFTV
YNGELLYSSPYYPLKFHFSNLLKYPDSVPYFGAPPLSQELGSITNIDREIAMHTQQLSEI
AAEKSRTRMDPIPTGSAGGTGSGKPKKGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCK
VCFRPFGDPSNLNKHIRLHAEGNTPYRCDFCGKVLVRRRDLERHVKSRHPGQTVKKLDEK
PGGLFEDAEQKSDSDVDVCFTDEQSDQESSKNND
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggttctgatctccccccgcgccatgcaagccacccgggcgcccaccacctccacggtc
agcgtgttcgcagactgcagcatcccggccgggctccggatcggaccggtaccgggccta
tgcaaactggggaagtacgtgtcggaccggaaggaaactgggccaaagaaaaaaatccgc
ctgatccgcggggagtttgtggacgagtccggctgtcccgtgccggactggatcgggttc
atccgcgccgcgaggagcagccaggagcagaacctggaggcggtgtcggacctacctgga
ggacagattttctaccgcgcgctgagagaaatcccggcgggagaggagctcagcgtgtgg
tactccaacaccctggcccagtggttcgatatccccaccacggccactcccacgcacgac
gagaaaggtgatgagcgttacatctgctggtactgctggagaatattcaaatacccgaac
actctcaaggcccacgtccacttccactgtgctctgagcaacgggcgggggtttgtgagc
agcgagcaggccagaggcacagagtccttcagcaggtcccccaaatccggagacatttcc
aacacctccacctctcccaggagcagccacagtaactcatcaggctcagactccggcagg
agggcggtgtcctcctctccgttcctaaacaaaacgcgagtgtcaaagaaaagcagctcc
gaggagcaggacagggcccttgatatgagcgtcacgtcagtcagaaaccagggacacctc
ctcggtctgggcgctacctcttcagtgctggccagtatggaattccacccgggcgtgcgc
tccgcctttaagcccactggcgtctccaaagtcctggatccttccagagaggaggcaaac
ggaaagttgagcggcttcggcttcactaaactcatcgggagcatgaaaccaatccgcagc
ttgggagagggcctgaacggaggcggaggtcacccgccaaagtgcgcgcccgctattatt
gactccacatctcagatggttccgtgcgcaaacccgatccggggtttcccgttgctgcaa
cacgtggaggaaacctcggcttttaaacacgtggagagccggatgcactccggcctgtcc
ccggcccgttacccccagatgccgcctgggcttcactttgagaggttctccctccctcac
tttgacggagtgaagtcctacagcggagactgtaacctccctctgatgcccttcaccgtc
tataacggagagcttctgtacagctcgccctactacccgctcaagttccacttcagcaac
ctcctcaagtacccagattccgtgccctacttcggcgcgccccctctgagccaggagctg
ggctccatcaccaacatagaccgggagatcgccatgcacacgcagcagctgtcggagatc
gctgcagagaagagccggacgcgcatggaccccatccccaccgggagcgcgggcggcacc
gggtcgggcaagcccaagaagggacacctgtgtctgtactgcggcaagctgtactcccgg
aagtacggcctgaaaattcacatgaggactcacacgggctacaagccgctcaagtgcaaa
gtgtgtttcaggcccttcggagacccgagcaacctgaacaaacacatccggctgcacgcg
gagggaaacacgccctacaggtgcgacttctgcgggaaggtgctggtccggaggcgggac
ctggagaggcacgtgaagtccagacaccccggacagaccgtgaagaaactggacgagaag
ccaggaggtctgttcgaggacgcggagcagaagagcgacagcgacgtggacgtttgtttc
actgacgagcagagcgaccaggagtccagcaagaacaacgactga
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