Nematolebias whitei (Rio pearlfish): 119410319
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Entry
119410319 CDS
T08042
Symbol
smg9
Name
(RefSeq) LOW QUALITY PROTEIN: protein SMG9
KO
K18735
protein SMG9
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119410319 (smg9)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
119410319 (smg9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
DUF6079_1st
URGCP_GTPase
AAA_16
AAA_30
ABC_tran
AAA_18
AAA_22
MMR_HSR1
NB-ARC
Motif
Other DBs
NCBI-GeneID:
119410319
NCBI-ProteinID:
XP_037533160
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Position
5:complement(23171266..23206441)
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AA seq
474 aa
AA seq
DB search
MSESGHSQPGMYGQGRRRRRRRGERDGPPGQNLSGPSRDREYQPRERRDGSEDPPGPLIQ
KTPIILAKPPGERAKSSQNAPVSGAAVPEKPIMLMKARDDAGKPAPEAAAQSAGPGPSKM
EKEGQRPTQPVYQIQNRGMGPSASSSVMDPMVGQSKLLHPEKMKHSIKLVDDQMNWCDSA
MEYLRDQTDMLVVGVIGLQGTGKSTIMSLLSSNAPEEDQRSYVFRAQTQEIKERGGNQST
GIDFFITQERVIFLDTQPMLSPSILDHVINNDRKLPPEYNLPHTYVEMQSLQITAFLFTV
CHVVIVVQDWFTDSNLYRXLQTSERANKIHKKRRIQLCTNMMKLVYLFMLLANWHLYEGT
LSMLDRNIFPGLGQEFLGTEVNMFLLPVQENDRDENLNKAGSGTYPLFSLLPGYRGHPTF
STLISKLRSQMLAMPRCQLSHTILTEKNWFHYAARIWDGVKKSSALSEYSRLLS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtccggccacagtcagcccggtatgtacgggcagggacgcagaagaaggcga
cgccggggagaaagagatggacctccgggacaaaatctgtctggccccagtcgagatcgg
gaatatcaaccgagagaacgaagagatgggagcgaggatccaccaggccctctcattcag
aagacgcccattattcttgcaaagcctccaggggaaagggctaaatcatcacaaaatgca
cccgtcagcggagctgcagtcccggagaagcccatcatgctaatgaaagccagggatgat
gcagggaagccagcgccagaggcagcagctcagtctgctggtcctggaccctccaagatg
gagaaagagggtcaacggccaactcaacctgtttaccagatccaaaaccgaggaatgggc
ccatctgcttctagcagtgttatggatcccatggttggtcagtctaaactccttcatcca
gagaaaatgaaacacagcatcaagcttgtggatgatcagatgaactggtgtgacagcgcc
atggagtatttgagggaccagacagacatgttggtggtgggagttattgggctgcaggga
actgggaaatctacaataatgtctctgttgtcatccaacgcacctgaggaagatcagagg
agttacgtattcagggcccagactcaagaaattaaggaaagaggaggaaatcagagcacg
ggtattgatttcttcatcacacaggagagagtcatcttcttggatacacagcccatgctt
agtccatctatcctagatcacgtaatcaacaacgatcgaaagttgcctccggagtacaac
cttcctcatacttatgtggaaatgcagtctcttcagatcactgccttcctgtttacagtg
tgccatgtagtgatagtggtgcaggactggttcaccgactcgaacctttacaggtaactg
caaacatctgagagggcaaacaaaatacataaaaaaagaagaatacagctgtgcacaaac
atgatgaaacttgtgtatctatttatgctcttagcaaattggcacctatatgagggaacg
ttatccatgttagaccgcaacatcttcccagggctcgggcaggaattcctgggtactgaa
gtcaacatgtttctgcttccagtccaagaaaacgaccgagatgaaaacctgaacaaagca
gggtcaggaacatacccactgttctctctgctgccgggatacagaggacaccccaccttt
tccactttaatctcaaaactccgcagccaaatgctcgccatgccccgctgtcagctgtca
cacactattctcacggagaaaaactggtttcattatgcagctcgtatctgggacggtgtg
aaaaagtcctcagcactctccgaatacagtcgactccttagttag
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