Nematolebias whitei (Rio pearlfish): 119410500
Help
Entry
119410500 CDS
T08042
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119410500 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119410500 (trip12)
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119410500 (trip12)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
HECT type E3
119410500 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
119410500
NCBI-ProteinID:
XP_037533308
LinkDB
All DBs
Position
6:12950550..13013704
Genome browser
AA seq
2018 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTAAGRSGLTLSVASFVLQDDQEAAGTSEQETL
FDRRQSKSKGTRGLKRGEAPDEISVLGPTPTKKPKSSLPAPRNNSSEAKKGPAKTKKRPV
ATESSASSGRSQGKKSVATGAPSLQKRKKSDTLPGLSSTAGSLPNCTEGRTAKATKLASK
SAASAKAGCSNVTDSSSSASSSSSSTTGSNSAATQGARVKQGKDQTKARRSRSASSPSPR
RSTRDKEQAKTPSSSKFEWATRFNTKVNLPKPKLSLPGSSKTEPSKPGPSGLQAKLASLR
KSPKKRSESPPAELPSFRRSTRQKTTGSCASTSRRGSGLGKRGAADARRQDKMADSDNNQ
DGANSSTARTDETSQGASASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFG
PLGPRMSQLFHRTIGSGASSKAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGF
PVKSVVPALITLLQMEHNFEIMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFI
DVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDE
FHFVDDSLSLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLL
VVTPPVLSSGMFIMVVRMLSLMCSNCPSLAVQLMKQNIAETLRFLLCGASNGSCQEQIEL
VPRSPQELYELTSLICELMPCLPREGIFAVDVMLKKGSAQTTEGAIWQWRDDRGLWHPYN
RIDSRIIETAHQNGEDEISLSTLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTG
SHQEVRREDARAQLMKEDPELAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFA
DAELLKDVLRNHAVSSHIASMLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQ
VKNLAESESILVTSPPKACSSGTASLCTTTISNASTTSANNATPDLGSPSFQHTMDDSLD
LSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKADNQAKSPTSTQSPKSSFLASLNPKT
WGKLGAQTNNANSEPSRTAGVSGLARVPPKDSISNNRDKIKAWIKEQASKFVERYFNSEN
VDGSNPALNVLQRLCTATEQLNLQVDGGLECLVEISIIVSESDVSSFEIQHSGLVKQLLL
YLTSNTDRDLLSRDIRLKRFLHVFAGCPLPALESLSRLDPIENAPYLALVHKMNSCLSQM
EQFPVKVHDFPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLAL
VQAIERYLVVRGYGRVREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLP
YNMTVYQAVRQYSLQAEEERESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGSKDAVGG
KRGRAQTAPTKTSPRNAKKQDELWHDGVCPSIINPLDTYLTSEPPETITFDDPSLEVTLL
LRVLQSISRYWFYLHDNAVCKEIIPTTEFINSKLTAKANRQLQDPLVIMTGNIPTWLTEL
GKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTIN
RDDLLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTQEFYALVSQELQRADLGLWRGEE
VTLANPKGNQEGTKYMFSSRGLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLL
DLPLGLPFYKWMLRHEMSVGSHDLTNIDPGVAKSIQHLEDIIRQKKKLEQDRSQTRETLQ
QALESLNMNGCSVEELGLDFTLPGFPNIELKKGGKDVPVTIYNLEEYLRLVVYWTLNEGV
SRQFESFREGFESVFPLHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSR
AIRFLFEVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLP
SVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccacacggcagctggaagaagtggtcttactctgtcagtg
gcttcgtttgtgctgcaagacgaccaagaggctgcaggaacatctgagcaggagactctt
tttgataggagacagtcaaaaagtaaaggcacccgaggacttaaacgaggtgaagcacct
gacgaaattagtgtccttggtccgacccctaccaagaagcctaaatcatccctccctgca
cccagaaataactcctcagaggccaagaaaggtcctgccaagaccaagaaaagaccagtt
gctacagaatcgtctgcatcgtcaggccgaagtcaaggcaaaaaaagtgtggccactggg
gccccttcactccagaaacggaagaaatcggacacactccccggtctaagtagcaccgct
gggtccctccccaattgtaccgagggcagaactgcaaaagccaccaagctggcgtccaaa
tctgccgcctcagccaaagctgggtgtagcaacgtgacagactcctcctcctctgcctcc
tcttcttcttcctccaccacaggctccaacagcgctgccacacagggcgcccgcgtcaaa
cagggaaaagatcagaccaaggcacgtcgctctcgatccgcttctagcccctcccctcgc
cgaagtacacgtgacaaggagcaggccaaaactcccagctcatcaaaatttgagtgggca
acacgcttcaacaccaaagtcaatttgccaaaaccgaaactttccttacctggatcctcc
aaaactgagccctccaagcctgggccatctggattgcaagctaaactagcaagtttgagg
aaatccccaaagaagcgcagcgagtctcctccagcagagctccccagttttcggcggagc
acacgccagaagaccacgggctcttgtgccagcacaagtcggcggggctcaggcctgggc
aagcgcggggcagctgacgctcgccgacaggataaaatggctgactccgacaacaaccag
gatggagccaactcatctactgctcgcactgatgagacatcacaaggagcttcagcttca
agctcagttgctggagcggtcggcatgaccacctcaggagagagtgagtctgacgattct
gaaatgggaaggcttcaagctttactggaggccagaggtctgccaccacatctttttggc
cccctcggaccccgtatgtcacaactttttcacaggaccattggcagtggagctagctcc
aaggctcagcagctgctgcagggccttcaggctacaggtgatgagtctcaacagctccaa
gctgcaatagagatgtgtcagctgctggtgatgggcaacgaggaaacactcggtggattt
cctgtaaagagtgttgtgcctgcattgattacactgttacaaatggagcataactttgaa
attatgaatcacgcctcacgagccctcacctacatgatggaggccctccctcgatcttcg
gctgtggtggttgatgccattcccgtcttcctggagaagcttcaggtgattcagtttatt
gacgtagcagaacaggcactgactgccttggaaatgttgtcaagacgacacagcaaagca
attttgcaggctggtgggcttgctgactgcctcctctatctggagttctttagcattaat
gctcagagaaacgccttggccattgcagctaactgctgccagagcatcactccagacgag
ttccactttgttgacgattctctctcgttgttaactcagagactcacacaccaggataaa
aagtcagttgaaagcacttgcctctgtttcgccagactggtcgacaactttcaacatgaa
gagaacctgctgcagcaggtggcatcacgagacctgttgaccaacattcagcagctgctg
gttgtcacccctcctgttcttagctcggggatgttcatcatggtggttcgaatgctttcc
ctgatgtgctccaactgcccgagtctggcagtccagctcatgaaacagaacatagcagaa
acccttcgtttcctcttgtgtggtgcatcaaatgggagctgccaggagcagattgagtta
gttcccagaagccctcaggagctctatgaactgacctccctcatatgtgagctgatgccc
tgccttcccagagagggcatctttgccgttgatgtaatgttgaagaagggcagtgctcag
acaacagaaggtgcaatctggcagtggagggatgaccggggcctctggcatccttacaat
cgcattgacagccgcattattgagacggcccatcagaacggagaagatgagatcagcttg
tcaactttgggtcgtgtctacaccattgacttcaactctatgcagcagatcaacgaagat
acaggaacagcacgtggaatccagaggaagcccaaccctcttgccaaccccaatacaggg
agtcatcaagaggtccgtcgagaagatgcacgagcccagttaatgaaggaggaccctgag
ctagccaagtgctttattaaaacactgtttggggtcttgtatgaggtgtacagctcttct
gctggccctgctgtcagacacaagtgccttagagccatcctcaggatcatttactttgct
gatgcagagctgctgaaggatgtgctgaggaaccatgctgtgtccagtcacatcgcctcc
atgctgtccagccaggacctgaagattgttgtgggttctctgcagatggctgaaattctc
atgcagaagcttcctgatgtcttcagtgtttatttcagaagagaaggtgtaatgcatcaa
gtgaagaaccttgcagagtctgagagcattctcgtcactagtcccccaaaagcctgctct
agtggtactgccagtctttgtaccacaaccatcagcaatgcatccacaacgtctgctaat
aatgcaactcctgacctgggctcccccagcttccagcacactatggacgactcactggac
ctcagcccacaggggcggttaagtgatgtccttaagcgaaaacggcttccaaaaagagga
cccagaagacctaaatactctccgccaagagatgatgataaagcagacaatcaggccaag
agccctacaagtacgcagtcacccaagtcgtccttcttggccagcctcaatcctaagacc
tggggaaagcttggtgctcaaaccaacaacgccaactctgagccatcacgcacagccgga
gtcagtggcctggcaagggtaccccccaaggactcgatttcaaataacagagacaaaatc
aaagcctggatcaaagaacaggcaagtaaatttgtggagcgctacttcaactctgaaaat
gtggacggcagcaaccctgcactgaatgtactccagagactttgcacagcgaccgagcag
cttaacttacaggtggatggtggtttggagtgcctagtggagatctccatcattgtatca
gaatctgacgtgtcatcttttgagatccagcatagtgggctggtgaagcagctgctgctc
taccttacctctaacacagacagagacttgctaagtcgtgacatacggctcaagaggttc
cttcacgtgttcgctggctgtccgcttccagcactggagtccttaagtcgtttggaccct
atagagaatgccccttatctggcacttgtgcacaagatgaacagctgtctgagccaaatg
gagcagttccctgtcaaagtgcacgatttccccagtggcaacggcaatggcagcagagga
tctcaggctctgaagtttttcaacacacatcagctcaagtgtcagctgcagagacaccca
gattgcactaatgtcaaacagtggaaaggtggccctgtgaagatcgaccccttagctctg
gtgcaggcgattgagcgatatcttgtggtcagaggatacggccgagtcagggaagaagat
gaagacagtgatgatgacggttctgatgatgaaatagatgaatcactggcagcgcagttc
ctgaactcgggtagcgtgcgtcacagactacagttctacataggtgaccatctgctgcca
tacaacatgacagtttaccaggctgtgaggcagtacagtctgcaggcggaggaagaaaga
gagtcgacagatgatgaagcaaatccacttggaagagctggaatctggaccaaaacgcac
acaatatggtataagcctgtgagagaagacgaggatggtagcaaagacgctgtgggtgga
aagcgaggccgagctcagactgctcccaccaaaacctcaccacgcaacgccaagaagcag
gatgagctgtggcacgatggcgtttgtcccagcatcatcaatcccttggacacatacctc
acttcagagccgccagagacaataacgtttgacgacccctctttagaggtcaccctgctg
ctgagggtccttcagtccatcagtcggtactggttctacctgcatgataatgctgtgtgt
aaggaaattattccaaccacggagttcattaatagtaaactgactgccaaagcaaaccgg
cagctacaagacccactggttatcatgacggggaacatccctacctggcttactgagctt
gggaaaacctgccccttcttcttcccctttgacacccggcagatgctattctacgtaact
gcttttgatcgggacagagccatgcagcgcctactggacacaaaccctgagatcaaccaa
tcagattctcaggacagcagagttgcaccacgtctcgacaggaaaaagagaacgataaac
cgtgacgacctcctaaaacaggcggagtctgtaatgcaggaccttggcagctccagggca
atgctggagatccaatatgagaacgaggtgggcacaggtctcggtcccactcaggaattt
tacgctctggtgtcccaggagcttcagagggctgatcttggtctttggagaggtgaagag
gtgactctggccaaccctaaaggaaaccaagaggggacgaagtacatgttcagctccaga
ggactgtttgccgttcccttcggcagaacgactaaaccagcacacatagccaaaattaaa
atgaagttccgtttcttgggaaagttaatggccaaagccattatggattttagactgctg
gatctgcctttaggactccctttttataagtggatgctacgacatgagatgtctgtgggc
tctcacgacttgacaaacattgatcctggcgtggccaagtccatccagcacctggaggat
atcatccgtcagaagaagaagttggaacaggaccggtcccagactagagaaaccctacag
caggccctcgagagcctgaacatgaacggctgctctgtggaggaactcggtttagacttc
actcttccaggattcccaaacatcgagctgaaaaagggaggcaaagacgtcccagtcacc
atttacaacctcgaggagtacctcaggttggtggtgtactggactttaaacgaaggagtg
tcgagacaatttgagtcatttagggaagggtttgagtccgtcttccccttgcatcaccta
cagtatttctatccagaggagcttgaccagttgctgtgtggcagtaaatctgagacgtgg
gatgtcaaaacgctgatggagtgctgtcgaccggaccatggctacacacatgacagccgt
gccattcggttcctgttcgaggtgctgagcagcttcgatgcggagcagcagaggctcttt
ctgcagttcgtcacaggaagcccgaggctgcctgttggaggtttccggagcctgaatcca
cctctgaccattgtgagaaagacttttgagtcgacggagaacccggacgacttcctcccg
tcagtcatgacctgcgtcaactacctgaagctgcctgactactccagcatagagatcatg
agagagaaactgttgattgctgctcgtgagggccagcagtctttccacctgtcctga
DBGET
integrated database retrieval system
