Nematolebias whitei (Rio pearlfish): 119410514
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Entry
119410514 CDS
T08042
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119410514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119410514
Membrane trafficking [BR:
nwh04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
119410514
Endosome - Golgi transport
Arf GTPase associated proteins
119410514
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
119410514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
SAM_1
SAM_2
PH_11
RA
PH_6
PH_8
SOS1_NGEF_PH
PH_3
Motif
Other DBs
NCBI-GeneID:
119410514
NCBI-ProteinID:
XP_037533323
LinkDB
All DBs
Position
6:11834906..11934128
Genome browser
AA seq
1607 aa
AA seq
DB search
MLTLTHASDAYSSIMSQSEPNTKVLDWLCKLRLEQYMEAFQSAGMETLHECLNLTPNQLD
RMGITRPGHQRRILTSLNNMHSVHNAEQTGLAEVMRKEVPVPVPVWGENLEGDKRDEETW
RPTPCERRKPVPKQRYWSKTQENSEEEALKPVPGKRSSVPAEKKDDSNLEMDEEKEKPIP
KQRTKFCTSSPIDCYAASHVPSSSDYSLPPVPPRINNCPLQHFTTSQSLSPRSLHSGCLR
TDQQSTLTPPVLCRSLPSVSSSISTPVPTEAPFPIPNIQFTESRPQTLAIQPSVLTLSSV
GVKKTSPVNPGPSASEVKSIPPLPPKVLGGPKGPPPIPQRVQAPSPRTHSLPITKTGTDE
LMPTDHIPPHNRASSMLESSQEPTRLDAQPALPPGRSPQLPSSGSVDENSDDYEDPDLFY
SSVHQNNMADGEMSLQVPKQQEMCYSFLDSDDECLDGDDLWQDKSPRSPSSSFHLPHTSR
PSPPIKEDNSQPSAVIKMGWLDKNLPQGVLYQRRWAKLDPDYLRYFDNEKDVYSKGIIST
AFISCVNSIGELKFEVVTSNRTFTFKAESEAERNNWVSSLQGCTRGRQRQSIINLVSTIN
PDHQGYLELRGLRCKYYTVVASDKVFLYKNLEDYRIGVGITSIDMNVGNIKESDRRSFDL
TTPYRTFNFIAESEQMKEQWVDAMRNAIGEALSNSEVAEQIWVEPSNSFCADCGAPKPDW
AAVNLCVLICKQCAGEHRGLGPSISKVRSLKMDKKVWTEELIQVFLELGNERVNSFWAAN
VPPSEALTPSSSSEDRRRFITNKYRQGKYRKYHPLYGNQSELNNALCINVQCSDLLETLS
LIFCGAEVNCSTGMEKCPTPEYIASAHSQPLQAEIIRHNLNTELPQLQVDSSMDLEHYQP
SPCASYTGFLFKTASMTRAATERKPKEEFSRRWCTLNDGIFSYYESDKNSNPNGVIKASE
LLCLAVDTPEKHGFEYTFELYSENERIYLFGTDDADSHKEWVKCLAKSFIPASAEPLLRL
SFDRIGRLKCKDGLNLQKSKVGWFALVGSTLHFYLEGSKGEEIHLRRVNELSIQQDSEVL
VLVERGRTLYIEGERKLDFAGWCGAIQAAGKSGGDCLSQQQLTETDVPVIVLSCIDYITQ
CGLMSEGIYRKSGVNSRVAALCDRFRQDARSLRLKEGDHQVDDVTNALKRFFRELEEGLF
TSGDAKTWLSVTGIQDEREKITQYKLLLDRLPRVNKATLQALINHLYCVQRYSELNQMNL
HNLAIVFGPTLFQTDGQDYTAGQAIEDLIQHYTLIFEVGEQQLSKQLDEIKAIIDLRNTH
TTKFPPYQKKEGDGHFICTVYLQETVPEEQLVKVPGSMTAAELTCEVLDRRNILVREKDY
WTCWEVCDKEDMERLLHYQERVLPILHSIGADSRLLIKKHPDIEAMKAFLANKMDVSKHG
IMKFREERSILGLGLPSGNFHERFFILNVTSLRMYKDVRSNRPEREWPVKSLKVYLGIKK
RLRPPTLWGLTVMYESKKQEKPEKQQWYVCCENQSEMREWYATLLSIQYDGDLWPQEGLP
QTRVGRTLPDTRQRNVVLIPLRGSENEMRNSVAAFSQDPLALYRDVR
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgctgacactcacacatgcatcagacgcatacagctcgatcatgtctcagtccgaaccc
aatactaaggtgctggactggttatgcaagctgcgtttggagcagtacatggaagcattt
cagagtgctgggatggaaacactgcacgagtgtctgaacctcacaccaaatcagctggat
cgaatgggcatcaccaggccaggtcaccagagacgcatcctgaccagtcttaacaatatg
cacagtgttcataacgcagagcaaacaggtcttgctgaagtcatgcgaaaagaagtacct
gttcctgtccctgtgtggggagaaaatctggaaggagacaaaagagatgaagagacatgg
agaccgactccttgtgagagacgtaaaccagtcccaaagcaaaggtattggtctaaaaca
caggagaacagtgaagaagaagcactaaagcccgttccaggaaaaagaagctcggtacct
gctgaaaaaaaagatgacagcaatttagaaatggatgaagaaaaggaaaaacccatacca
aaacagaggactaaattttgcacaagttctccaatcgactgctacgctgcctcccatgtg
ccttcatcgtctgactattccctaccccctgtacccccacgcattaataactgccctcta
cagcacttcaccacttcccagagtctctcaccacgctctttacattctggttgcttgaga
acagatcaacaaagtaccttaaccccacctgtactgtgcagatctctgccttcagtttct
agttctatcagtacccctgttcccactgaagcaccattccccattcccaacatccagttc
actgaaagtaggccacagacattggccattcaaccatctgtcctaactttaagtagtgtt
ggagttaaaaagacttcacctgtcaatcctggcccgtctgcctccgaagtaaaaagtatt
ccacctcttcctccaaaagtgttaggaggacctaagggcccaccaccaataccacagcgg
gttcaagcaccgtctcccaggactcacagcttacccataaccaagactggaacagatgag
ctcatgccgacggaccatattccaccccacaacagggcatcttcaatgctagaaagcagc
caggaaccaactcgtctggatgcacagccagcgctgcctccagggaggtccccacaactt
ccaagctctggttcagtcgatgagaactcggatgattacgaggatccggacttgttttac
tccagtgttcatcagaacaacatggcagacggggaaatgtccctacaagtacctaaacaa
caagaaatgtgttacagtttcctggacagtgatgacgagtgcttggacggtgacgacctt
tggcaggacaaaagccccaggagcccatctagcagttttcacctgccacacaccagcaga
ccctctccacccattaaagaagacaactctcaaccctctgctgtcatcaagatgggatgg
ctggacaagaatctacctcagggggttctttaccagagacgatgggccaagttggatcct
gactatctgagatactttgacaatgaaaaggatgtgtactccaaggggatcatttcaaca
gcgttcatcagttgtgtgaacagcataggggagcttaagtttgaggtcgtcacaagcaat
cggacttttaccttcaaagctgaaagtgaagctgaaagaaacaactgggtgagctcactg
cagggctgcaccagggggcgccagcgacaaagcatcattaatcttgtttccacaataaac
cccgatcatcagggatatttggagctcagagggctacgctgcaaatattatactgttgtc
gcctcagataaagtctttctctacaaaaatctagaggattatcgtattggagtggggatc
acatctattgacatgaatgttggcaatattaaagaatcagatcgtcggagctttgatctc
acaaccccttatcgcaccttcaacttcatagcagagtcggagcagatgaaggagcagtgg
gtggacgccatgaggaacgccatcggtgaggcactgtccaatagtgaggtggccgagcag
atctgggtggagcctagcaacagtttctgtgctgactgtggtgctcccaagccggactgg
gcggccgtcaacctgtgtgtgctgatctgcaaacaatgcgcaggagagcacagaggattg
ggtcctagcatctcaaaagtacgtagtctgaagatggacaaaaaggtgtggacagaggag
ctcattcaggtatttttggagctcggtaatgagcgggtgaacagtttctgggcagctaat
gtccctccaagtgaagctttaacgccctcaagcagtagcgaggacagacggcgcttcatc
accaacaaatatcgccagggcaaatacaggaagtaccatcctttgtatggtaaccagagt
gagctcaacaacgctctttgcataaatgtgcagtgcagcgatttgctggagactttgagc
ctgattttctgcggtgcagaagtgaattgttcgactggtatggaaaaatgtccaacccct
gaatacatcgccagtgcacattcacaacccctgcaggccgaaataatcagacataacctc
aacacagagctgccacagttacaagtagacagcagtatggatctggaacattaccagccg
tcaccatgtgcgtcttacacgggctttctgttcaaaactgcctccatgacccgggctgcc
acagaacgcaagcccaaagaggagttcagtcgtcgttggtgcacgttaaacgatggcatc
ttcagctactatgaaagtgacaagaactccaaccctaacggagtgataaaggcgtcagag
ctgctctgtttggctgtcgacacacctgagaaacatgggtttgaatatacctttgaactg
tactctgaaaatgagcgtatttatctgttcggcactgatgatgcagacagccacaaggag
tgggtcaagtgccttgccaagagctttatcccagcctctgcagagcctttgctgcggttg
agttttgatcggattggacgtctaaagtgtaaagacggcctgaacctacaaaaatccaaa
gtaggctggtttgctcttgttggctctacgcttcacttctacctggagggcagcaaagga
gaagagatccacctccgccgagtgaatgaactttcaattcaacaagacagtgaagtgttg
gttcttgtcgagaggggaagaactttatacatcgagggagaaaggaagctggactttgct
ggctggtgcggggccatccaggcagcaggaaagagcggaggagactgtctgagccagcag
cagctcacagagacagacgttcctgtcatcgtactcagctgcattgactacatcacacag
tgcggtttgatgtctgaaggaatttatcgcaagagtggtgtgaattcccgtgtggcagct
ttgtgcgacaggttccgccaagacgctcgcagtcttcgtctgaaggaaggggaccatcag
gtagacgatgtcaccaacgcacttaaacgcttcttcagggagttagaagagggacttttt
acgtcgggggacgccaagacgtggctcagtgtcaccggcattcaggatgaaagggaaaaa
atcacacagtacaagctcctgctggacagacttcctcgtgtcaacaaggctacactacaa
gctcttatcaaccacctctactgtgtgcagcgttattctgagctaaatcagatgaacctc
cacaacctggccatagtgtttggtcccactctgtttcaaaccgatggacaggactacaca
gccggccaggccattgaggacctcatacagcactacacactcatctttgaggtgggtgaa
caacagctaagcaagcagctggacgagatcaaagccatcattgacctgcgaaatacacac
accacaaaatttcctccctatcagaaaaaggagggtgacggccacttcatttgtacagtg
tacttgcaagaaactgtgccggaagaacaacttgtcaaagtgcctggttccatgaccgca
gcagagctgacatgtgaggttttggaccgacgtaacattctagttagagaaaaagattac
tggacctgctgggaggtctgtgataaagaagatatggaacgtctcctgcactatcaggag
cgagtcttgcccatccttcactctattggagctgattcccgtctgctaatcaagaaacat
cctgatatagaggctatgaaggccttcctggccaataaaatggatgtatccaaacatgga
ataatgaagttcagagaagaacgaagcatcttgggattggggctgccgtctggaaatttc
cacgaacgattcttcattctcaacgtcacctcgctcagaatgtacaaggatgtcagaagt
aaccgtccagaacgagaatggccggtgaaaagcttgaaggtttacttaggaatcaagaag
agactccgtcctcccacactttggggcctgacggtaatgtatgagagcaagaaacaagag
aaaccagagaagcagcagtggtatgtctgctgtgaaaatcagtctgaaatgagggagtgg
tacgccacacttcttagtattcagtatgacggtgacctgtggcctcaggaaggactcccg
cagacccgggtgggccgcactcttccagatacgcgccaacgtaatgtggtactgataccg
ctgcgtggcagtgagaatgagatgcggaacagcgtagcggctttcagccaagacccgctt
gctctctatagagatgtgcgataa
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integrated database retrieval system
