Nematolebias whitei (Rio pearlfish): 119410612
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Entry
119410612 CDS
T08042
Name
(RefSeq) rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04270
Vascular smooth muscle contraction
nwh04625
C-type lectin receptor signaling pathway
nwh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
119410612
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
119410612
09153 Circulatory system
04270 Vascular smooth muscle contraction
119410612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119410612
Membrane trafficking [BR:
nwh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
119410612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
SOS1_NGEF_PH
PH
BNIP3
DUF7744
Motif
Other DBs
NCBI-GeneID:
119410612
NCBI-ProteinID:
XP_037533425
LinkDB
All DBs
Position
6:complement(28717026..28730220)
Genome browser
AA seq
1211 aa
AA seq
DB search
MKEKYNRNPSPKLLKDIQEATKHIPQLQGQLFKATGTTQEAVSGGDEDNGSIIETDCALA
PKGDNSTDLSWSSTPVSHTLGPVSPDSHCPKDSSCASPKSTPRNSFNSCHSPEAEDGTDL
DPLSPITVTSRPPYRFGVQIIGAEDDCFDSDQEQTNGQCNSFNSIDQLKCRPAHLAAFLH
HVISQFDPAPVLCYLYADFYKQTNPKETRRVFLDFHTIFMDRAANLKVPVPESVSSDLNR
RRTDLIPEEINRQYVQTLQDSLFPDILKNLEDFRQKRSMGLTVAEVELNRLDQERVRDRV
TLERECSYAENIISKIDDILVTTQPTEEEKCTTIQYVIYTYMKHLGVRVKEPRNLEPKRV
RISFLPKMKKSIKSEKEGDEKVEKKPRFTFRAPQRWPSRNDGIKGPDNRTRPQRQVSQPI
LVTNEQMEGVLRGSQSSEGPELTHSMSVNTSSPNSITNNSDTSQDADIGGTPTSGPSKLT
DGIQSDPLGGLSCPASHLEFFSLDHLQEDDRESDRAPEGTPKAIRRLEGLGAVDVQSEDD
QGTDSEHDPPNWQQLVGREVLAGLRPHEIKRQEVINELFYTERAHVRMLKVLDHVFYQKL
SKDAILPPADIKNIFTNLEEVLQLHVSLLEQMTAVRKRNGSSVIDQIGDDLLSWFSGGEE
KIKQAVGTFCSNQPFALEIIKTKQKKDSRFTSFIQEAESNRLCRRLQLKDIIPVEMLRLT
KYPLLLDNIVKYTDNSEEKVKVKQAADCCRRILSHVNQALKESEDKQKLEDYQRRLDLSS
LKQTDNPMILELKNLDLTKKTLIHEGPLSWKVNKDKTIELYTLLLEDILVLLQKQDERLI
LKCHSTNLAGTADTKHIYSPIIKQSTVLVRSVATDNKSFFVISMSENGPQIYELMAPTVS
DKKTWQSLISQRADTMKTKPHSVIPLPQPDGERDGVEIISAGASRLSRDADRTSTGSAQF
TDKESNSSPRSALQSSPIGSNPFEEEKKDEEEEEGFVDPELPYQVAEVDREGDLFDAFPS
RAEEALKTLAALKQVLVTQLMSQEAAEQTKRSTGARLLRTTSLRTPTDSRAMVMVHNSSE
KSSSKTQDLAQDLGSGDTGFFDSPEDYGCLVLEGYGGPGESSTDDDIMASTNGKQLSTSQ
VCAADSGINLRFSSTSQVGSLSSFSRQVLSHLRNLQTNLNCLKEVEAKYNNLIRQRPERS
ITDMDENKDKR
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagaaatacaacaggaacccctcccccaaactactgaaagacattcaggaagca
acaaaacacattcctcagctgcagggtcagctcttcaaggccacagggacaacacaggag
gctgtttcaggtggagatgaagacaatggtagcatcatagagacagattgtgcacttgcc
cctaaaggagataacagcacagacctttcctggagcagcactcctgtatctcacacgctt
ggacccgtatctcctgatagccactgtccaaaagactcctcctgcgccagcccaaaaagc
actcccaggaacagcttcaactcctgccactccccagaggcagaggatggaactgacctg
gaccctctgtctcccatcacagtcaccagtcgccctccttatcgctttggcgtgcaaata
ataggagctgaagatgactgttttgattcagatcaggagcaaacaaacggccagtgtaac
agctttaacagtattgatcagctcaagtgtcgtcctgcccacctcgcagcattcctgcac
catgtcatttcccagttcgaccccgctccagtgctgtgctacctctatgctgacttctat
aagcaaactaaccccaaagagaccagacgagtgttcttggactttcacaccatctttatg
gaccgggcagcaaatttaaaagttcctgttcctgaatcagtttcttctgatctcaaccgc
cggcggacggacctgatcccagaggaaataaacaggcagtatgttcaaacactgcaggac
tctctgttccctgacattctgaaaaacctcgaggacttcaggcagaaacgtagcatgggc
ctaactgtggctgaagttgagctgaacagactggaccaagagagagtcagagatcgggtt
actcttgagcgggaatgttcgtatgccgagaacatcatcagcaaaatagatgacatcttg
gtgaccactcaacccacagaagaagaaaaatgcactacaatacagtatgttatctataca
tacatgaagcaccttggtgtgagggtcaaggaacctcgaaatctggagcccaaacgtgtt
cggatcagcttcctccctaagatgaagaaaagcatcaagtcagaaaaggaaggagacgag
aaagtggagaaaaaacccagatttactttccgtgcaccacagcgttggcccagtcgcaat
gatgggattaaagggccggacaatcgcaccaggccacaaagacaggtctctcagcccata
ctggtgacgaatgagcaaatggaaggtgttctaagaggcagccaatcaagtgaaggccct
gaactcactcactccatgtctgtcaacacctcgtctccaaacagcatcaccaacaactca
gacaccagccaagatgctgatattggtgggacaccaacatcaggcccctccaagctgact
gatggtatccagtctgacccgctgggtggattatcatgtcctgcttcacacttggagttt
tttagtctggaccatcttcaagaggatgacagagaaagtgacagagctcctgagggaaca
ccaaaagccatcagaagactcgagggactgggtgctgtagatgttcagagtgaggatgat
cagggcaccgactccgaacacgatccaccgaactggcagcaattggtgggacgagaggtc
cttgcaggtctcaggcctcatgagatcaagagacaagaagttatcaatgaactgttttac
acagagcgcgcacatgtacgaatgctcaaggttctggaccatgttttctaccagaagctt
tccaaagatgcaatccttcctcctgctgacatcaagaacatcttcaccaatctggaagag
gttctacagctgcacgtttcattacttgagcaaatgacagctgttcgtaagagaaacggg
tcttcagtgatcgatcaaataggagacgacttgctctcgtggttcagcggtggagaggag
aaaatcaagcaagcggtggggacattttgcagtaaccagcctttcgctctggagatcatc
aagaccaagcagaagaaagactcaaggttcacttcattcatccaggaggcagagagtaac
agactgtgtcgccgactgcagcttaaagacatcattcctgtagaaatgctgcggctcacc
aagtatcctctgcttctagacaacattgtcaagtacacagataattcagaggagaaggtc
aaagtaaagcaggcagcagactgctgtagaaggatcctcagtcacgttaaccaggctttg
aaagagtctgaagacaagcagaaattagaagactatcagagaagactggacctctcctca
ctgaagcagacagacaaccccatgatccttgagctaaagaacttggatctaaccaagaag
acgttgattcatgagggtccactgtcatggaaagtgaacaaggacaagactattgagttg
tacactcttctcttggaggacattctcgttctgctgcagaaacaagacgagcgtttaatc
ctgaagtgtcacagcacaaacctggcagggaccgcagataccaaacacatctacagcccc
atcatcaagcagagcactgtgctagtgcgttctgtggctacagacaacaagtccttcttc
gttatctccatgtcagaaaacggtccccagatctatgagttaatggcgcccacagtctcg
gataaaaagacgtggcaaagtctgatctcccagcgggctgatacgatgaaaaccaaacct
cacagcgtcataccattacctcagccggacggggagagagatggagtggagatcatatca
gcaggtgcttccagactgagtagagacgcagaccgcacgtccaccggcagcgctcagttc
acagataaagagagcaattcatcccctagaagtgcactgcagagttctccaattggtagt
aatccatttgaagaggaaaagaaagatgaagaggaggaagaaggatttgtggacccagaa
cttccatatcaagtggctgaagtcgacagagaaggagacttgtttgatgcgtttccctcc
agagcagaggaagccttaaaaacattggcagcattaaagcaagtgttagtgactcagctg
atgtcccaggaggcagcagagcaaaccaaacgctccactggagcccgtctcctgaggacc
acctctttgcggaccccaacagacagccgcgctatggtgatggtccacaacagctcagag
aaaagcagttcaaaaacacaggacctggctcaggacctggggtcaggggacactggattc
tttgactcacctgaagattacgggtgtttagtcctggagggctacggtggtcccggggag
agcagcaccgatgatgacatcatggcatcaaccaatgggaagcagctaagcacctcgcaa
gtctgtgctgcagactctggcatcaatttaagattttcctcaacgtcacaggtcggcagc
ctctcctctttcagcagacaggtgctgtctcaccttagaaaccttcagaccaacctcaac
tgtctgaaggaggttgaggctaagtacaataatttaatacgccaaagaccagagaggtca
ataacagacatggatgaaaacaaagataagagatag
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