Nematolebias whitei (Rio pearlfish): 119410617
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Entry
119410617 CDS
T08042
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119410617
Cell adhesion molecules [BR:
nwh04515
]
Immunoglobulin superfamily
DSCAM family
119410617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
C1-set
Pur_ac_phosph_N
Ig_6
V-set_CD47
Interfer-bind
fn3_2
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
119410617
NCBI-ProteinID:
XP_037533430
LinkDB
All DBs
Position
6:30123027..30279537
Genome browser
AA seq
2096 aa
AA seq
DB search
MWLVTLLLLYSLQEVNSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGGAPHAVLRWY
LAAGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSIIHDNEYFCTAENQAGKIRSPSIHVK
AVFREPYTVRVADQRSMRGNVAVFKCLIPSAVQEYVSVVSWEKDTVSIVPGNRFFLTSFG
TLYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESTPNVLDSFQSGEVQVG
HSVELPCIASGYSNPTIRWLKDGRPLPADSRWTHRITGLTISDLRLEDSGNYICEVTNSF
GSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHFTVSWYRNTEPVMPDQH
FSIQGAHNETLFISAAQKRHSGAYQCFASRKGQTAQDFSIILLEDGTPRIVTSFSERVVV
PGEPFSLMCAAKGAPPPTITWTLDDEPVARDLSRVRSSQYTLSDGSTVSYVNISSPQIRD
GGLYRCAARNSAGSAEYQARINVRGPPRIRPMKNITAVAGRNTFINCRVIGYPYYSINWY
KEELLLPDNHRQVVFENGTLKLSDVQKGMDEGAYVCSVLIQPRLFITETVYITVKVPPLI
QPFDFPPTSIGKLMYIACVVSSGDMPIRITWRKDGQEIVPSSGITIDTKEFMSSLQISKV
SLKHNGNYTCIASNDAATVSTERQLTVTVPPRFVVQPNNQDGIYGKAAILNCSVDGYPPP
KVMWKHARGALAGIGNPQQYHPVPLTGRIQIMNNGSLLIRHVLEEDRGFYLCQASNGVGS
DISKSMVLTVKIPAMITSHPNTTMAKKGHLKELNCTARGEWPIIIRWERGDTVIDPDRNP
RYSITTSPNEKTDEVLSTLKLKPAEREDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPEL
EIREVKDRSMNLRWTQRFDGNSVITSYDIEYKNKTDSWELKHATRNISPTNNQANIVDLH
PASVYSIRMYSYNAIGKSEASKELTISTEEAQPDGPPMDVTLQAVTSQSIRVTWKAPRKE
LQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAG
TGPSSSEINATTLEDVPSQPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRVVFWAV
FPDGEWGEMQNITTIKEQVELKGLEKFTNYSIQVLAFTQAGDGVRSNVLYIQTREDYPGP
PAGIKAVPSSASSVVVSWLPPHKPNGIIRKYTIYCSSPGSGQPMPSEYEANPELLFYRIT
HLNHRQQYLIWAAAVTTAGRGNFSDKVTVEPAAKAPAKILSFGGTVTTPWVKEVRLPCSS
VGEPTPTIKWTKDSEDTAIPVSLDGQRLILANGTLVLRSVKAEDSGYYTCTATNTLGFDT
IIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWKDVFI
SSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDQPVFTYLNS
SHARLNLLGWVSGGCPITSVTLEFRPKGTWVWQTVRTNTTADVFLAELREATWYEMKMKA
CNSAGCGNQSSQFATLDYDGSTIAPIKSPLKKNDDVKKLFSIGSPVILVTLGVALLFIIR
KKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIK
QIGDDKATIPVTDTEFNQTGNPQSFCTGVSIHHPALIQNTGPLIDMSDIRPGTNPVSRKS
VKSAHSIRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDK
GRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGTNDNAD
SMTSMSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRAKSDYCNLPLYMKSDPFFRKQ
SEHHDPCPVVPPREASIRGLAQRVYHSQGRHVTLDSTKQPALSMGHSGLSNLSSSATSSG
GASGGGGGSGGVSASSSSSTLPQRTLTMPGSSAAAAQSAAAAAAATAAAAAGASSSSGGG
GAAGATGGTPGGASSSSSKIGGSRDSLLESSSSGLGRLQKQRDGGSGAYSKSYTLV
NT seq
6291 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttacttctgctgtattctttgcaagaagtcaacagtgaggatgtt
gtctctacgcggctgtactttgtgaacgcctccctgcagcgagtgaccttctccagctcg
gtgggggtgtccctgccctgccccgcgggcggcgccccccacgccgtcctgcgctggtac
ctggccgccggagacgacatttacgacgtgccccatatccgccacgtgcatgccaacggc
accctccagctctaccctttctccccctctgcctataacagcatcatccacgacaacgag
tacttctgcactgctgagaatcaggcgggcaagatccgaagccccagcatccacgttaaa
gcagtgttcagggagccctacacagtccgtgtggccgaccagcgctccatgcggggcaac
gttgccgtgttcaagtgcctcatcccttcagctgtccaggagtacgtcagcgtggtgtcc
tgggagaaagacaccgtttccatcgtccctggtaatcgtttcttcctgacctcatttggc
actttatatatctcagaagtgcagaaggaagatgctttgtccacataccgctgtatcaca
aagcacaagtacagtggagagacccgccagagtaatggagccagactctctgttatggac
cctacggagtccacccctaatgtgctggacagtttccagtctggtgaagtgcaggtgggt
cacagtgtggagctgccctgcatcgcctccggctactcaaaccccaccatccgatggcta
aaagacggtcggccattaccagcagattcccgctggactcaccgcatcacgggcctcacc
atctctgacttgagactcgaggacagcggcaactacatctgtgaggtcaccaatagcttt
ggctccaaggaggtgaccggtcacctcaatgttatagagcccctgcgggtcacattgtct
ccaaagaacttgaagactgggatcagtagtactgtcatcctctcctgtgctgttcaaggt
tcccctcactttacggtgtcctggtaccgtaacacagaacccgtcatgcccgatcagcac
ttttccatccagggagctcacaatgagaccttgttcatttctgctgcgcaaaaaagacac
tcgggcgcctaccagtgcttcgcctcgaggaagggccaaactgcccaggacttctccatc
atactgctagaagatgggacaccccgtatcgttacctctttcagtgaaagggttgtcgtc
ccgggtgaaccgttttccctgatgtgtgctgccaaaggagcccctccgcccactatcacc
tggaccttggatgatgagcctgtggcccgggatctgtcacgggtcagatccagccagtac
acactctccgacgggagcaccgtgagctacgtgaacatcagcagcccacagattcgcgat
ggaggattgtatcggtgcgccgcacgaaactcggctggtagtgccgagtaccaagcgcgc
ataaacgtaagaggtcctccaaggattcgccctatgaagaacatcactgcagtggcagga
agaaacactttcataaactgtcgtgtaattgggtatccttattactcaattaactggtac
aaggaggaactcctgttgcctgacaaccatcgccaggtggtgtttgagaatgggacactg
aagctcagtgatgttcagaagggcatggacgaaggcgcctacgtctgcagtgtgctgatc
cagccacggctattcatcaccgagaccgtttacatcacagtcaaagttcccccgctgatc
caaccatttgacttccccccaacttccattggcaaattgatgtacatcgcctgtgttgtg
tcatctggagacatgcccatacgcatcacgtggcggaaggacggccaggagatcgtaccc
tcctcgggcatcaccatcgacacaaaggagttcatgagctccctgcagatctccaaagtg
tctctcaaacacaatggcaactacacctgcattgctagcaatgatgctgctactgttagc
acagagaggcagctcacagttacagtacctcctcgatttgttgtgcagcccaacaaccag
gatgggatctatggaaaggcagcaatcctgaactgttctgttgatggatacccccctccg
aaagtcatgtggaagcatgccagaggtgcactcgcgggtattgggaacccacagcaatac
caccccgtgcctctcactggccgtattcagataatgaataatggctctctgctcatcaga
catgtcctggaagaggatcgtggtttctacctttgtcaggcctccaacggagtgggttca
gacatcagcaagagcatggtgctcacagtcaaaatcccagcaatgatcaccagtcatccc
aacaccactatggctaagaagggtcatttgaaggagctgaactgcacagccaggggagaa
tggcccatcatcattcgctgggaaagaggcgacactgtgattgaccctgatcgcaatccc
agatactccataaccacgagtcccaatgagaagacagacgaggtgttgtctactctaaag
ctaaagccagcagagcgtgaggattctgtcttcttttcttgtcatgctatcaactcttac
ggagaaggaagaggccttattcagctcactgtgcaagaacctccagaccctccagagctg
gagatccgagaagtgaaagatcgcagcatgaatctcaggtggacgcagagatttgatgga
aacagtgtcattacctcttatgatattgaatataaaaataagacagattcgtgggagctg
aagcatgccactcgaaacatctcccccacaaacaatcaggccaacattgtggacttgcac
cctgcctctgtctacagcatccggatgtattcctacaacgctataggcaagagcgaggcc
agtaaggagctcaccatcagcacagaggaagcgcagcctgacggtcctccgatggatgtg
acccttcaggcagtaacttctcaaagtatcagagtcacttggaaggctccaaggaaggag
ctgcagaacggggtgatccggggttaccagatcggttacagagagaacggcccaggaagt
aacggccagtacagcattgttgagatgaaagccactggagacagtgaggtctacactctc
gacaacctgaagaagtttgctcagtacggcgtggttgtccaggccttcaacagagcaggc
accggaccttcaagctccgagatcaatgctacaacactggaagatgtgcccagtcagcct
cctcagaacgtgcgagccatttctgtaacatcagatgaggctgtgatcacatgggctgag
cctccaaggctgactctccacggcgtactgaagggatatcgtgtcgtgttttgggccgtc
ttcccagatggagagtggggtgaaatgcaaaacattaccaccatcaaagagcaggtggag
cttaaaggcctggagaagtttactaactacagcatccaggtcttggccttcacccaggca
ggagatggtgtcaggagcaacgttctgtacattcaaacccgggaagattatcctggaccc
ccggctggcatcaaagctgtgccctcctctgccagcagtgtcgtagtgtcatggttaccc
cctcacaagccaaatggaatcatccgcaaatacacaatttactgctccagccctggatca
ggccaaccgatgccaagtgagtatgaagctaacccagagttgctgttttaccgaatcacc
cacctcaaccaccggcagcagtacctgatctgggctgcagctgtcaccacagcaggccgc
ggtaacttcagtgacaaagtgaccgtagagccagccgccaaagctcccgccaaaatcctg
tcatttggaggtacagttacaactccttgggtaaaagaggtgcggctaccctgcagttct
gtgggtgaaccaacaccaaccataaaatggaccaaagatagtgaggatacagcaatccct
gtgtctctggatggacagcgtcttattctggctaatgggacactggtgctgcgctccgtc
aaagctgaagactctggttattacacctgcacggccaccaacacgttgggctttgacacc
attatagttaaccttttggtgcaagttcctccagatcaacctcgtctaaccgtgtccacc
acctccacctcctccatcacccttgcctggataccaggagataatggaggcagttctatc
agaggttttgttctgcagtactctgtggacaatacagaggaatggaaggatgttttcatc
agttctagcgagcgctcttttaaactggacaacctacgatgcgggacctggtataaagtg
aagttggctgccaagaacagcgtcggtgctggtcgcatcagtgagatcatcgaggcaaag
actcatgggagagaaccccagttcaacaaagaccaacccgtcttcacctacctgaactcc
agccatgcccgcctcaacctgctgggctgggtgagtgggggctgtccaatcacttctgtc
actctggagttcagaccaaaagggacatgggtgtggcagactgtgcgaaccaacaccacc
gcagatgtgttcctggcggagctgcgggaggccacctggtatgaaatgaagatgaaagca
tgcaacagtgcaggctgtggcaaccagagttcccagtttgcaacactggactatgatggc
agcacaatcgctcccatcaaatctcctctgaaaaaaaacgatgacgtgaagaagttgttt
tccatcggctcccctgtgattctggtcactctcggcgttgcactcctcttcatcattcgc
aagaaacgcaaagaaaagaggctgaaaagactaagagatgctaaaagcctggcagagatg
ctgatcagtaaaaacaatcgcagctttgacaccccagtgaaaggacctcctcagggccca
cggttacacattgacatccccagagtgcagttgctaattgaggacaaagagggcatcaag
caaattggtgacgacaaggctactatccctgtgacagacacagagttcaaccaaacgggg
aaccctcagagcttctgcactggtgtatctatccatcaccctgccctcatccaaaacaca
ggtcctttgatagacatgtctgacatcagaccaggaaccaacccagtgtcgagaaagagt
gtgaagtcggcccacagcatcaggaaccgatactccagtcagtggactctgaccaagtgt
caggcttccacgccagcccgcactctcacttcagactggcgcacagtaggctcccagcat
ggcatcactgtcaccgaaagtgacagctacagcgccagcctctcacaagacacagataag
ggacgcaacagtatggtgtccacagagagcgcttcctccacctacgaggaattggcgaga
gcgtatgagcacgccaagctggaggaacacctgcagcatgccaagtttgagattacagag
tgtttcatctctgacagctcatccgatcaaatgaccacagggaccaatgacaatgcggac
agcatgacgtctatgagcacgccgtcagagcccgggatctgccgtttcactgcctcacca
cccaaaccccaagactacgaccgtggcaagaatgtagctgtgcccattccacaccgcgcc
aagagtgattactgcaatcttcccctctacatgaagtcagatccctttttcagaaagcag
tcagaacatcatgacccgtgtccagtggttccgccacgagaagcctctattcggggcctg
gcccagcgagtgtaccacagccagggccgtcatgtgactctggactctacaaagcagccg
gctctatccatgggccactccgggctttccaacctcagctcctccgcgacttcctctgga
ggagcgtcaggaggcggtggaggaagtgggggagtgtctgctagctctagcagttccaca
cttccccagaggactctaaccatgcctggctcctctgctgcagcagctcagagcgcagcc
gcagccgctgcagccacagctgcagcagctgcaggcgcatcatcctcctctggtggaggc
ggagcagcaggggccacaggtgggacccctggaggtgcctcctcttcttcctccaagata
ggaggatccagagactctcttctggagagcagctcctcgggcttaggcagactacagaag
cagagggatggaggctcgggggcatactccaagtcctacacattggtgtag
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