Nematolebias whitei (Rio pearlfish): 119410639
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Entry
119410639 CDS
T08042
Symbol
stx1a
Name
(RefSeq) syntaxin-1A
KO
K04560
syntaxin 1A
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
119410639 (stx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119410639 (stx1a)
Membrane trafficking [BR:
nwh04131
]
SNARE
Syntaxin (Qa)
Stx-PM
119410639 (stx1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
ATG17_like
PspA_IM30
Lzipper-MIP1
ALIX_LYPXL_bnd
Ferritin
DUF948
DUF677
FAN1_TPR
CCDC28
FUSC
Dna2
Spectrin_Anc-1
GyrB_insert
DUF6584
EcoEI_R_C
Motif
Other DBs
NCBI-GeneID:
119410639
NCBI-ProteinID:
XP_037533452
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All DBs
Position
6:32340268..32407187
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AA seq
263 aa
AA seq
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MDKGFMDEFFEQVEEIRGFIESLAEKVEEVKRKHSAILASPNPDEKTKAELEDLMADIKK
LANKIRSKLKSVQQTIEQEESQNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRER
CKGRIQRQLEITGRNTTNEELESMLESDNPAIFTSGIIMDNITQQAMNEIETRHNEIIKL
ENSIRELHGMFMDMAMLVESQGEMIDRIEYNVEHSVDYVERAVSDTKKAVKYQNKAQRKL
LLVGGCVSVLLTVLIISLAVGLS
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggataaaggcttcatggacgaattcttcgaacaggtagaagagatccgaggttttatc
gagtctctggcagagaaagttgaagaggtgaagaggaagcacagcgccatcctcgcctcg
ccgaacccagatgagaagactaaagctgagcttgaggatctaatggcagacatcaagaaa
ctggccaacaaaatacggtctaaattaaagagtgtccagcaaaccattgagcaggaagag
agtcagaaccggtcctcagctgacctgaggatacgtaaaacacagcactccacactgtct
cgcaagtttgtggaggtgatgtcagaatacaacgccacccagtcggactacagagagcgc
tgcaaaggacgcattcagaggcagctggagatcaccggcagaaatacaacaaacgaggag
ttggagagcatgttggagagcgacaacccagctatctttacctcggggataataatggac
aacatcacccagcaggccatgaatgagattgagacgcggcacaatgagatcatcaagctg
gagaacagcatcagagaacttcacggcatgttcatggacatggccatgctggtggagagc
cagggggagatgatagaccgcatagagtacaacgtggagcactcggtagactatgtggag
agggcggtttcagacactaagaaggcggttaaataccagaataaagctcagaggaagttg
ctcctggtaggaggttgtgtctcagtccttctgaccgtcctgataatttccctcgcagtg
ggactcagttag
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