Nematolebias whitei (Rio pearlfish): 119410642
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Entry
119410642 CDS
T08042
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119410642 (smc4)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
119410642 (smc4)
Condensin II
119410642 (smc4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
HIP1_clath_bdg
Laminin_II
Crescentin
ABC_tran
Motif
Other DBs
NCBI-GeneID:
119410642
NCBI-ProteinID:
XP_037533454
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Position
6:complement(32634481..32655076)
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AA seq
1290 aa
AA seq
DB search
MPSKTAKRSTKPREDSEDERDVPPPEPRSNGQQEEAPPTAADPSLGEAAEAVDNRSLEEI
LGSIPPPPPPAMTNEPGAPRLMITHLVNRNFKSYAGEQILGPFHKRFSCIIGPNGSGKSN
VIDSMLFVFGYRAQKIRSKKLSVLIHSSDKHKDVQSCCVEVHFQKIIDKEGDDYEVIPNS
KFYVSRTANKDNSSAYFISGKKATFKEVGALLRSHGIDLDHNRFLILQGEVEQIAMMKPK
GQTEHDEGMLEFLEDIIGSCRLKEPIQVLSRRIELLNEQRGEKLNRVKLVEKEKNALEGE
KNKAVKFLMLENDIFKHKSHLYQHNAHDLQKCVVEKEQEKQKILEETKELTEKTAKISQE
MEKLDQERKNVEKKQNKIIKYIESHKQKFTQLDLQDVELHEKKKHCESKNGTLQKQLKKD
QKKLEEVRSVPGSSEEAISEATARKEELEKQKAKEEEKLKEVMESLKEETSGLQQDKEKK
EKELMELSKAVNETRSRMDLAQSELDIYLSRHKTALTQLNTAKQTLQTTSETLQERSAAI
KDLQLTIPQKEQELKKDQMELEQLMKVDNETREIVRELRQKVDEAKSSLSSNRSRGKVLD
ALMQLKKSGRIPGIYGRLGDLGAIDEKYDVAISSCCGALDNIVVDTIDTAQKCVTFLKEQ
NIGVATFIGLDKMKVWEKNMASIRTPEDIPRLFDMVRVNDESVRPAFYFALRDTLVAKDM
EQATRLAFQKDKRWRVVTLKGQIIEIAGTMTGGGRVMKGRMGSCISAEVSQVELDRMESK
LNEKVSRLQSCQERKLQLEENVQRLQPQLREMKNTLEKYTNSMSSLADQETHLKLQIKEL
EANVLAAAPDKAKQKQMEKSLEAFKKDYESASSKARKVETEVNRLHNLIVDINSHKLKAQ
QDKLDKINKELDDCSSIITKAKVAIKTADRNLKKCEEGIARVQGDLEKGEKLLVKLNEQL
KTLEEEAGEIIKACHEAEASLPDVQEQYRALTKEINALQQQEHALQEESLNVRLSIEKID
AFISKQNSKIKHWQDEAAKLSLHTIDGQPAEELQVLSAAELEGTSNPNIIANKISALEVH
CGQIKPNLGAIAEYKKKEELYLQRVAQLDEVTTERDRFKRAYEDLRKRRLTEFMTGFNII
TNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLA
LVFALHHFKPTPLYFMDEIDAALDFKNVSIVASYIYEQTKNAQFIIISLRDHMFEKADRL
IGIYKTHNTTKNVGINPKSIAFKELQLIST
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgccatctaaaactgcgaaacgctccaccaagcctcgggaggactcggaggacgagcgg
gatgtaccccctccagaacccaggtccaatggccaacaagaggaggcaccaccgacagca
gctgatccgtctctgggggaggctgccgaggcagttgataaccgaagtttggaggagatt
ctcggcagcatccctccacccccgcccccagcaatgaccaatgaaccgggcgctccccgc
ctcatgatcacacatttagtcaatcgcaacttcaagtcgtacgcaggcgagcagattctg
gggcctttccacaagcgattttcctgcatcattggtcccaatggaagtggaaagtccaat
gtgatagactcaatgctctttgtgtttggctacagagctcaaaagatcagatcaaaaaag
ctctcagtgctgatccacagctctgataaacacaaggatgtgcaaagctgctgtgtggag
gtgcattttcaaaagattattgacaaggaaggagatgactacgaagtcatccccaacagc
aagttctacgtttccaggactgccaacaaagacaattcctcagcctactttatcagtggc
aagaaagccacattcaaagaggtgggggctttactccgaagccatggtattgacctagac
cacaacagatttctgatcttacagggtgaggtggagcagattgccatgatgaagcctaaa
ggtcaaacggagcacgatgaagggatgctggagttcttggaggacatcattggttcctgt
cgactcaaggagccgatccaagttctgtctcgccgcattgagcttctcaatgagcagaga
ggagagaagctaaatagagtgaagctagtggaaaaggaaaaaaatgctttggaaggagaa
aaaaacaaagctgtgaagtttctaatgctggagaatgatatctttaaacacaagagtcac
ctttatcaacataatgctcatgatctacagaaatgtgtggtggaaaaagagcaggaaaag
cagaagattttggaggaaactaaggaactcactgaaaaaacggcaaagatctcacaagaa
atggaaaaattggaccaagagcgcaaaaatgtcgagaaaaaacaaaataagatcatcaag
tacattgagagccataaacaaaagttcacccaactggacctgcaggatgtggaattgcat
gagaagaaaaaacactgcgagagcaagaacgggacgttgcagaagcagctgaagaaagac
cagaaaaagctggaggaagtacgcagcgtaccaggcagcagtgaagaagccatctctgag
gcaacagcccgcaaagaagagctggagaaacagaaggcaaaagaagaagaaaaactgaaa
gaagtgatggaaagtcttaaagaagaaaccagtggcttgcagcaggacaaagagaaaaag
gaaaaagagctcatggaactcagcaaggctgtaaatgagacccgttctcgtatggatcta
gcccagtcagaacttgacatctatcttagtcgccacaaaactgctttaacacagctcaac
acagccaaacagacacttcagacaacttctgagacgctgcaggaacgctctgctgccatt
aaagacctccagctcacaataccccagaaggagcaggaactcaagaaggaccagatggag
ctggagcagctcatgaaggtggataatgagaccagagaaatagtaagagaactgaggcag
aaggtggatgaagccaagagctccctgtcctctaatcgcagtcgaggaaaagttctggat
gctttaatgcagctgaagaagagtggcagaattcctggcatctatggaagattgggagac
cttggagccatagatgagaagtacgatgtagccatttcctcttgttgtggggctctggat
aacattgtagtggataccatcgacacggctcagaagtgtgtgactttccttaaagaacaa
aatatcggggtcgccacgttcattggccttgacaagatgaaggtgtgggagaagaacatg
gcttctattcgcactccagaggacatccctcgcctgtttgacatggtgcgagtgaacgat
gagagcgtgcgaccagccttctactttgccctgagggacacactcgtagccaaagacatg
gagcaggccacgagactggccttccagaaagacaagcgctggagggtggtcaccctgaag
ggacagatcattgagatcgcaggaaccatgactggaggagggagagtgatgaagggcaga
atgggttcttgtatcagtgctgaggtctcccaggtggagcttgatcgtatggagagcaag
ctgaatgagaaagtgtcgaggctgcagagctgccaggagagaaagctgcagctcgaggag
aacgtccagcgcctgcagccacagctcagagagatgaagaacactctggaaaaatacacc
aacagcatgagtagtttagctgaccaagagactcacttgaaactccagattaaggagctt
gaagccaacgtgctggctgctgccccagacaaggccaaacagaaacagatggagaagagc
ctggaggcgttcaaaaaagattacgagtcagcgtctagtaaggctaggaaggtggaaact
gaggtgaacagactccacaacctgattgtggacatcaacagccacaaactgaaggctcag
caagacaaactggacaagatcaacaaggagctggacgactgctcctccattataaccaag
gccaaagtggccataaagacagctgatcgaaacttgaagaagtgtgaggagggtatcgct
cgtgttcagggtgatctggagaagggtgagaagctgctggtcaagctcaatgaacagctg
aaaacactggaggaggaggctggagagatcatcaaagcctgtcacgaggcagaggcctct
ctgcctgacgttcaggaacagtaccgtgcgttgaccaaagaaataaatgccctgcagcag
caggaacacgccctgcaggaagagtccctcaacgtccgcctgtccatcgagaaaattgac
gccttcatctccaaacagaacagcaagatcaagcactggcaggatgaggctgcgaagctt
tcccttcacaccatcgatggccaaccagcagaggagctccaggtgttatctgctgccgag
ctggaaggcacctctaatccaaacatcatcgccaacaagattagcgccttagaagtccat
tgtggtcagataaagcccaacctgggggccatcgcagagtacaagaagaaggaggagctg
tacctgcagcgtgtcgctcagctggatgaggtcaccacggagcgggacaggtttaaacga
gcgtacgaggatctgcgtaaacggcggctcacagagttcatgacgggcttcaacatcatc
accaacaagctgaaggagaactaccagatgctgacgctgggcggagacgccgagctggag
ctggtggacagtttggaccccttctctgaaggcatcatgttcagtgttcgtcctccaaag
aaaagctggaagaagatctttaacttgtctggaggagaaaagaccctcagctctctggct
ctggtgttcgctctgcaccattttaaacccacgccgctctacttcatggacgagatcgac
gccgctctggacttcaagaacgtctccatcgtggccagttacatatacgaacaaacgaag
aacgctcagttcatcatcatctccttgagggaccacatgttcgagaaggccgaccgtctc
attggcatctacaaaactcacaacacgaccaagaacgtcggcatcaaccccaaatccatc
gccttcaaagaactccagctcatctccacataa
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